Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01291 ATGGTGATTGCTGATAATAAGATTAGTGAGGACCAGAGGGAGATTAGTGCTCCCAAGTCAATATTGAAGAGAGGTGCCCCAAGTTTTGGCAAGAAAAAAAGGGTACGCTGGGCAGAAGATGTAGTTGATGTTCCAGTGTTGGTTGTTGGAACCAATTCTTGGCCAGCTCTTTCTGATGCTCAAACTCCAAAACCTAAGAATCATGGTGAGAAAGTCTCTGCTAAGGGTGAGGATGTAGCAGTTTTTGTGCCAAGTGTTGGTCAGGCTGCTCCTAGAGCTCCTTCCGTCCAGAAGTCAAACGGTTCTGGAAACTTCAATCCGATGAATAACATGCCATCACCACACTATCAAAAGCCAGGCCCTAAGCGCAACAGTAACACAAATGGCACGCCTCACTTTCCTGTGGCGAAGATGCCTTATCATAAGCAGCCGCCTCACATTGCTGTTCCTTATCCGAATGGTGCGAATCTTAAGCCTGTATCCCCGGTGGCAGCAGGACAAGAAAGCTTGGAACGAAGACGGAAAACTATATATATAACCCGTCACTGTCAAACTAATTTAAATGAACGGGTTTCATTACAAGATCCATCTGAGCATAGCATGGAACAACAGCAGCTGAAATCTGACACCAATTTGAATAAGGTTGGTCGTGCTTTCGCGAAATTGACTATAAACTGCAATGAAAATAAATTAGTTCAAGCTGAGTCAGTACCAGAAGAAAGTCGTGCTTCAAAGAGAGTACGGAGGGAAAGGATAAACTGGGAAGAAGATGAAGACAAGTTGTTTTTGAAGGGGCTGAAAAAACATGGAAAGGGATGCTGGAAAGATATTTCAAAAGAATTTGTGGTGCTAAAATCTTCAACTCAAGTTGCTAGCCATGCCGAGAAGAGGAATAAGAGAAGAAGCATTCACGACACAACCTTAAACAAGAATGACACATCAGTCACTGCTCCTATGGAACAATATGAGAATCCTCCTCAAGACACAGCCACCTCAAGACAAATGCAGTTGGTGCTGCTCTGTCCAATCGGTTCTACACTTCCTGATATGAACAAACTTGAGAAGATGTGCAACTTGTTCAACTTGTTGGCAAAAGACCTTTGA 1104 0.4339 MVIADNKISEDQREISAPKSILKRGAPSFGKKKRVRWAEDVVDVPVLVVGTNSWPALSDAQTPKPKNHGEKVSAKGEDVAVFVPSVGQAAPRAPSVQKSNGSGNFNPMNNMPSPHYQKPGPKRNSNTNGTPHFPVAKMPYHKQPPHIAVPYPNGANLKPVSPVAAGQESLERRRKTIYITRHCQTNLNERVSLQDPSEHSMEQQQLKSDTNLNKVGRAFAKLTINCNENKLVQAESVPEESRASKRVRRERINWEEDEDKLFLKGLKKHGKGCWKDISKEFVVLKSSTQVASHAEKRNKRRSIHDTTLNKNDTSVTAPMEQYENPPQDTATSRQMQLVLLCPIGSTLPDMNKLEKMCNLFNLLAKDL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01291 367 MobiDBLite consensus disorder prediction 308 330 - -
Mepo5g01291 367 ProSiteProfiles Myb-like domain profile. 246 290 IPR001005 -
Mepo5g01291 367 Pfam Myb-like DNA-binding domain 253 294 IPR001005 -
Mepo5g01291 367 SUPERFAMILY Homeodomain-like 247 299 IPR009057 -
Mepo5g01291 367 SMART sant 250 300 IPR001005 -
Mepo5g01291 367 MobiDBLite consensus disorder prediction 92 129 - -
Mepo5g01291 367 MobiDBLite consensus disorder prediction 89 129 - -
Mepo5g01291 367 PANTHER TRANSCRIPTION FACTOR KUA1 190 326 - -
Mepo5g01291 367 MobiDBLite consensus disorder prediction 293 307 - -
Mepo5g01291 367 NCBIfam myb-like DNA-binding domain, SHAQKYF class 250 296 IPR006447 GO:0003677
Mepo5g01291 367 Gene3D - 252 302 - -
Mepo5g01291 367 MobiDBLite consensus disorder prediction 293 330 - -
Mepo5g01291 367 CDD SANT 253 296 IPR001005 -
Mepo5g01291 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 246 302 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01291 Mepo-Chr5 13143170 13146094 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g01291 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01291 - K18757 mtr:25495062 303.138