Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01284 ATGCTTGCAACATCTTGGACTTACAGGAACATGGAAGGAAGAAAAGTGCAACAATTACCTCATCATATTGATTTAAACGAGCGGACTTCAATTCATGATCCCTCTGAGAATAGCATGGAACAACAACAAGAGAAACTTGACGACACCGATGTCATTGAGTCAGGTCATGCCGTCGCAATTCTAAACTCTAATAATAATAACTTAGTTCAAGCCGAGTCAGTACCAGAAGGAAGTCGTGAAGCAAAGAGAGGGCGTAGGGAAAGGGTACATTGGACGGAAGGTGAACATAAGTTGTTTCTGGAGGGGCTAGAAAAATATGGCAAGGGACGTTGGAAAGATATTTCAAAAGAATTTGTGGTGACAAAGACTCCGATTCAAATTGCTAGCCATGCCCAAAAATACTTTATCCACCAAAATGTGAAAGATGTAGAGAAGAGGAAGAAGAGAAGAAGTATTCACGATGCAAGCTTAAACAAGAATGGCACACTAGTCACTCTCGCTGTTGACCAACAAGATGAGATTCCTTCCGTTGAGCAACAAAATGAGACTCCTCCTCAAGGAATGCAACAGACACAAACACAACAAAATGAGATTTCTCCTATGTTGTGCTTGCTTTGTCCAATCGGTTATACAATTCCGGATATAGAGAAACTTGGGAAGATGCGCGACTTATTGGCAAAAGAACTTCAACGCTAG 696 0.4124 MLATSWTYRNMEGRKVQQLPHHIDLNERTSIHDPSENSMEQQQEKLDDTDVIESGHAVAILNSNNNNLVQAESVPEGSREAKRGRRERVHWTEGEHKLFLEGLEKYGKGRWKDISKEFVVTKTPIQIASHAQKYFIHQNVKDVEKRKKRRSIHDASLNKNGTLVTLAVDQQDEIPSVEQQNETPPQGMQQTQTQQNEISPMLCLLCPIGYTIPDIEKLGKMRDLLAKELQR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01284 231 CDD SANT 91 135 IPR001005 -
Mepo5g01284 231 ProSiteProfiles SANT domain profile. 91 139 IPR017884 -
Mepo5g01284 231 Pfam Myb-like DNA-binding domain 88 135 IPR001005 -
Mepo5g01284 231 SUPERFAMILY Homeodomain-like 85 139 IPR009057 -
Mepo5g01284 231 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Mepo5g01284 231 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 138 IPR006447 GO:0003677
Mepo5g01284 231 Gene3D - 89 140 - -
Mepo5g01284 231 SMART sant 87 137 IPR001005 -
Mepo5g01284 231 FunFam transcription factor MYB1R1 89 140 - -
Mepo5g01284 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 139 IPR017930 -
Mepo5g01284 231 PANTHER TRANSCRIPTION FACTOR KUA1 31 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01284 Mepo-Chr5 13051501 13054165 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g01284 Myb_DNA-binding 5.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01284 - - mtr:11416947 363.999