Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01283 ATGGAAGGAAGAAAAGTTCAACAATTACCTCATCATATTGATCTAAATGAGAGGACTTCAATTCAAGATCCCCCTGAGAATAGCATGGACCAACAGCGAGAGAAACTTGACACTGATGTTGCTGAGTCGGGTGGTGCCGTTGCAATCCCAAACTCTAATGATAATAACGTCGCAACTCTAAACTCTAATGATAATAACTTGGTTCAGTCTGAATCAGTACCAGAAAGAAGTCATGAAGCAAAGAGAGGGCGTAGGGAAAGGGTACATTGGACGGAAGGTGAACATAAGTTGTTTCTACAGGGGGTGAAAAAACATGGTAGGGGACGTTGGAAAGATATTTCAAAAGAATTTGTGCTAACAAAAACTCCAACACAAATTGCTAGTCATGCTCAAAAATACTTTGTTCACCACCAAACTGCCAAAGAAATAGAGAAGAAGAAAAAGAGAAGAAGTATTCACGACATAACCTTAAACAACAATGATACAATAGTCACTCTACCTCGTGAACAACAACATGAAATTCCTCCTCAAGACACAGAAACCTTAAATAATAAGGACAATGACAACTTGCAACAAACCCAACAAATGTATCAGTTGGCCTTGCTTTATCCAATCGGTACTACACTTCCTGATATGAACAAACTTGAGAAGATGCGCAACTTGTTCAACTTGTTGGCAAAAGACCTTTGA 690 0.3899 MEGRKVQQLPHHIDLNERTSIQDPPENSMDQQREKLDTDVAESGGAVAIPNSNDNNVATLNSNDNNLVQSESVPERSHEAKRGRRERVHWTEGEHKLFLQGVKKHGRGRWKDISKEFVLTKTPTQIASHAQKYFVHHQTAKEIEKKKKRRSIHDITLNNNDTIVTLPREQQHEIPPQDTETLNNKDNDNLQQTQQMYQLALLYPIGTTLPDMNKLEKMRNLFNLLAKDL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01283 229 SMART sant 86 136 IPR001005 -
Mepo5g01283 229 MobiDBLite consensus disorder prediction 61 87 - -
Mepo5g01283 229 ProSiteProfiles SANT domain profile. 90 138 IPR017884 -
Mepo5g01283 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 138 IPR017930 -
Mepo5g01283 229 MobiDBLite consensus disorder prediction 1 19 - -
Mepo5g01283 229 Pfam Myb-like DNA-binding domain 87 134 IPR001005 -
Mepo5g01283 229 SUPERFAMILY Homeodomain-like 84 138 IPR009057 -
Mepo5g01283 229 Gene3D - 88 144 - -
Mepo5g01283 229 PANTHER TRANSCRIPTION FACTOR KUA1 22 189 - -
Mepo5g01283 229 ProSiteProfiles Myb-like domain profile. 82 134 IPR001005 -
Mepo5g01283 229 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 136 IPR006447 GO:0003677
Mepo5g01283 229 CDD SANT 90 134 IPR001005 -
Mepo5g01283 229 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01283 Mepo-Chr5 13034042 13035969 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g01283 Myb_DNA-binding 8.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01283 - - mtr:11416947 283.878