Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01282 ATGGCAGCTTGTACTGTCTACTCAACACAACCTCTAAGAACAAACATCTCAATTCCAACATCATCAAAAACACATGTTGGTTTTAATCAAAAACAGGTAGTGTTCTACACAACAACCAAAAAGAGCAACAACAGAAGAACTAACAGTAACAACAGAAGATACTTGATAACATGTGGAGCAGGTGACTCACAGACAATTGTGATTGGTCTAGCAGCTGATTCAGGATGTGGAAAAAGTACTTTCATGAGAAGACTCACAAGTGTTTTTGGAGGTGCAGCAGAGCCACCAAAAGGTGGAAATCCTGACTCAAACACACTTATCAGTGACACAACCACTGTGATATGTTTGGATGATTACCATTCTTTGGATAGAACTGGTAGAAAAGAGAAAGGTGTTACTGCACTTGATCCAAGAGCTAATGATTTTGATCTTATGTATGAACAAGTTAAAGCTATTAAAGAGGGTATTTCTGTTCAAAAACCTATTTATAATCATGTTACTGGTCTTTTGGATCCTCCTGAGCTTATTAAACCACCCAAAATCTTGGTCATTGAAGGTCTTCACCCAATGTATGATTCTCGAGTTAGAGATCTTTTGGACTTCAGTATCTACTTAGACATTAGCAATGAGGTGAAATTTGCTTGGAAAATTCAGAGAGACATGGCAGAACGTGGACACAGTCTTGAAAGTATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCTTATATTGATCCACAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACCCAACTAATTCCAGATGATAATGAAGGAAAGATTTTGAGAGTGAGGTTGATCCAGAAAGAGGGTGTTAAATACTTTAGCCCAGTTTACTTGTTTGATGACGGTTCTACAATTTCATGGATACCATGTGGAAGGAAACTTACATGCTCTTATCCTGGCATTAAATTTTCCTATGGACCAGAGACTTACAAAGGAAATGAGGTGTCAGTTGTGGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATACGTTGAGAGCCACTTAAGCAACCTCTCTTCCAAATTCTATGGAGAAGTTACTCAACAAATGTTGAAGCATGCTGATTTCCCTGGTAGCAACAATGGAACAGGTCTCTTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTATTTGAGCAGATAGTAGCAAGCAGGGCTGAGACTCCAGTAGGAGCAGCTAAAGCTTAG 1236 0.3875 MAACTVYSTQPLRTNISIPTSSKTHVGFNQKQVVFYTTTKKSNNRRTNSNNRRYLITCGAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGISVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFSYGPETYKGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAETPVGAAKA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01282 411 FunFam Phosphoribulokinase 62 292 - -
Mepo5g01282 411 PANTHER URIDINE KINASE 52 312 - -
Mepo5g01282 411 Gene3D - 62 299 IPR027417 -
Mepo5g01282 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 335 IPR027417 -
Mepo5g01282 411 CDD PRK 67 355 - -
Mepo5g01282 411 PRINTS Phosphoribulokinase family signature 234 257 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mepo5g01282 411 PRINTS Phosphoribulokinase family signature 72 89 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mepo5g01282 411 PRINTS Phosphoribulokinase family signature 181 199 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mepo5g01282 411 PRINTS Phosphoribulokinase family signature 216 233 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mepo5g01282 411 Pfam Phosphoribulokinase / Uridine kinase family 67 265 IPR006083 GO:0005524|GO:0016301
Mepo5g01282 411 ProSitePatterns Phosphoribulokinase signature. 216 229 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01282 Mepo-Chr5 13023033 13026946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01282 119 293 PRT Gene Family AT3G27440 25.843 3.05e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01282 K00855 - gmx:100807126 739.954