Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01280 ATGGCTGCAAACTGGAATTTTTTTTCTCTCCCCAACAGTACTATCATTTACCCTCATTGGTATTCATCAAAAACTGGAATTTACAATAGTTTACAGTCTCCTAGGAACCTTCCGACCGACCCTTTTCTCGACGTTGTATCCTTCATCTTTTCTCACCCTCATGATGGGGTTTTAGCCCTTGTTGATTCCTCATCTGGGTCTTCCATTTCTTACTCAAATTTGTTAACTTTAGTCAAATCCTTGGCTTCTGGCCTTCATAAAATGGGTGTTTCACAAGGTGATGTTGTTTTGCTTTTACTTCCAAATTCAATTTACTATCCCATTGTACTATTGAGTGTTATGTATCTAGGTGCTGTTGTTACACCATTGAATCCTCTTAGTAGTGTATGCGAAATTCGTAAGCAGGTTAAGGAGTGTGGTGTGAGCTTTGCTTTCACTATACCTGAAAATATCAAGAAGCTAGAGTCATTAGGCATTCCTGTTATTGCTGTGCCAGAAAATGAAATGGATTTGAAGCATGATTGTTTCTCATGTTTTTATAACCTTACTTATGGTAAATTCCATTCAATAAAGAAAAACCTTATTTATGGTGACTTTGATTTGCCTCAAAGGCCGGTTATTAGACAAGAAGACACTGCCGGTATATTGTATTCTTCTGGTACTACAGGTGTGAGCAAAGGAGTTGTTTTAACTCATAGAAATCTTATTGCTATGGTTGAGCTTTTTGTGAGGTTTGAAGCTTCTCAATATGATTACTCTAGCTCCAAGACTGTGCATCTAGCTGTTTTGCCGATGTTCCATTTATATGGTTTATCACTCTTTGCTACCGGATTATTGTCATTGGGTTCTACAATCGTTGTAATGAGGAAATATGACATCGATGAGGCTATTAGGGCGATTGATAAATATAAAGTTACACACTTTCATGTTGTTCCAATGATGTTGTCGGCATTGACAGCGAAGGCAAAGGATGGTAATGGAAGTAAGTTGCAGAGTTTAAGACATGTCTCTTGCGGTGCAGAGCCTTTGAGCAAAGGAGCTATAAATGATTTTGTGCAAGCTTTCCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAGTCGGGCGCAGTAGGAACACGCGGCTTCAATACTGATAAGTTTCACAACTATTCCTCACTAGGGTTGTTAGCTCCAAACATAGAAGCAAAAGTGGTAGATTGGAAAAGTGGTACATTTTTGCCCCAAGGCCTCAGCGGTGAGCTTTGGTTGAGAGGGCCTTCAATTATGAAAGGATACTTGAATAATGAGGAAGCTACAATGTCAACAATTGATAAGGATGGTTGGCTACATACTGGAGATATTGTTTATTTTGATCAAGATGGATATTTATATTTGTCTGGCCGTTTGAAAGACATTATCAAATACAAGGGCTTTCAGATTGCTCCTGCTGATTTAGAAGCTTTGTTAATTTCGCATCCTGAAATAGTTGATGCAGCCGTTACAGCTGGCAAGGTTGATGGAGTTGGGGAGATTCCAGTGGCATTTGTGGTAAAGAAAGTTGGAAGTGTACTTTCTTCAAACCATGTGATTGATTACGTTGCTAAGCAGGTTGCTCCATACAAGAAGGTTCGGAAAGTGGTCTTCACAGACAAGATACCGAGATCTGCAACTGGGAAAATCCTCCGAAAGCAACTCAGGAATTGCTTGACTTCTATGCTCTGA 1707 0.3931 MAANWNFFSLPNSTIIYPHWYSSKTGIYNSLQSPRNLPTDPFLDVVSFIFSHPHDGVLALVDSSSGSSISYSNLLTLVKSLASGLHKMGVSQGDVVLLLLPNSIYYPIVLLSVMYLGAVVTPLNPLSSVCEIRKQVKECGVSFAFTIPENIKKLESLGIPVIAVPENEMDLKHDCFSCFYNLTYGKFHSIKKNLIYGDFDLPQRPVIRQEDTAGILYSSGTTGVSKGVVLTHRNLIAMVELFVRFEASQYDYSSSKTVHLAVLPMFHLYGLSLFATGLLSLGSTIVVMRKYDIDEAIRAIDKYKVTHFHVVPMMLSALTAKAKDGNGSKLQSLRHVSCGAEPLSKGAINDFVQAFPNVDFIQGYGMTESGAVGTRGFNTDKFHNYSSLGLLAPNIEAKVVDWKSGTFLPQGLSGELWLRGPSIMKGYLNNEEATMSTIDKDGWLHTGDIVYFDQDGYLYLSGRLKDIIKYKGFQIAPADLEALLISHPEIVDAAVTAGKVDGVGEIPVAFVVKKVGSVLSSNHVIDYVAKQVAPYKKVRKVVFTDKIPRSATGKILRKQLRNCLTSML 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01280 568 Gene3D - 466 566 IPR045851 -
Mepo5g01280 568 Pfam AMP-binding enzyme 57 470 IPR000873 -
Mepo5g01280 568 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 562 - -
Mepo5g01280 568 FunFam Long-chain-fatty-acid--CoA ligase FadD 33 465 - -
Mepo5g01280 568 SUPERFAMILY Acetyl-CoA synthetase-like 54 565 - -
Mepo5g01280 568 FunFam 4-coumarate--CoA ligase 2 466 567 - -
Mepo5g01280 568 Pfam AMP-binding enzyme C-terminal domain 480 554 IPR025110 -
Mepo5g01280 568 Gene3D - 35 465 IPR042099 -
Mepo5g01280 568 ProSitePatterns Putative AMP-binding domain signature. 215 226 IPR020845 -
Mepo5g01280 568 CDD 4CL 37 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01280 Mepo-Chr5 12996715 12999557 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01280 18 566 Monolignol Biosynthesis Gene Families AT4G19010 59.273 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01280 K01904 - gmx:100804808 822.387