Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01279 ATGGCTGCAAATTTCAATTGTGACATGCCACAAAATACCATCACTCAGCCTCATTGGTATTCACCAAAAACTGGAATTTACAATAGTATACACTCTCCTAGGAAACTTCCAACCGACCCTTTTCTCGACGTTGTTTCCTTCATCTTTTCTCACCCTCATGATGGGGTTATAGCCCTTATTGATTCCTCATCTGGGACTTCCATTTCTTACGCAAAATTGTTACCTTTTGTCAAATCAATGGCTTCTGGTCTTCATAAAATGGGAGTTTTACAAGGTGACCTTGTTTTGCTTCTACTTCCAAATTCAATTTACTATCCCATTGTACTATTGGGTGTTATGTACCTAGGTGCTGTTGTTACACCATTGAATCCTCTTAGCAGTGTTGATGAAATTCGTAAGCGGGAAGACACTGCTGCTATATTGTTTTCTTCTGGTACTACTGGTGTGAGCAAAGGAGTTGTTTTAACTCATAGAAATCTTATTGCTATGGTTGATGTTTTGGAGAGGTTGGAAGCTTCTCGACATGAATACTCTAGTTCCAAGAATGTGTGTCTAGCTGTTTTGCCGATGTTCCATATATATGGTTTATCGCTCTTTGCTACGGGATTATTGTCATTGGGTTCTACAATCGTTGTAATGAGGAAATTTGACATTGATGAGACTATTAGGGCGATCGATAAATATGACGTTACTCACGTTTATGTTGTTCCACCGATATTGTCGGCATTGACAGCAAAGGCAAAGGGTGTAAATGGAAGTAAGTTGCAGAGCTTGCGACAGGTCGGTTCTAGTGCAGCGCCTTTAAGCACTAAAGTTATAAATGATTTTGTCCAAGCTTTCCCTAATGTTGATTTAATACAGGGTTATGGAATGACCGAGTCGGGTGCATTAGCAGCATGCGGTTTCAATACTGAAAAGTTTCACAACTATTCTTCACTAGGGTTGTTAGCACCAAACATGGAGGCAAAAGTGGTAGATTGGAATAGTGGTGCATTTTTGCCCCCAGGCAGAAGTGGTGAGCTTTGGTTGAGAGGTCCTTCAATTATGAAAGGATACTTGAATAATGAAGAAGCTACAATATCAACAATTGATAAAGATGGCTGGCTACATACTGGAGATATTGTTTATTTTGATCAAGATGGATATTTATATTTATTTGACCGCTTGAAAGAATTTATCAAATACAAGGGCTTTCAGATTCCTCCTGCGGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTGGATGTCGCCGTTACAGGTGCCAAGGATGAAGAAGCTGGGGAGATTCCGGTGGCATTTGTGGTCAAGAAAGTTGGAAGTGTACTTTCTCCGAAGGATGTTATCGATTACACAGCTAAGAAGGTTGCTCCATACAAGAAGGTTCGGAAAGTGGTCTTCATCGATAAGATTCCGAGGAAGTCATCAATTACAAGAATAGTAGACTACCCTTCAAGGCTGTTTTGCCAATGTTCCACGTATATGGTCTATCGCTCTTTGCTATGGGGTTATTGTCGTTGGGGTTCTGCAATCGTTGTAATGGGGAAATTTAACATTGATGAGGCTATAAGGGTGGATGATAAATATATTGTTACACATTTTGACGTTGTTCCACCGATGTTGATGGCATTGACAAAGAAGGCAAAGGGTGTTAATGTTGCTCCATTCAAGAAGGTTCGGAGAGTGGCCTTCACAGACAAGATACCGAGGTCGGCAGCTGGGAAGATCCTCCAAAAGCAACGCAGGAATTTCTTGACTTCCAAGAAATAA 1773 0.405 MAANFNCDMPQNTITQPHWYSPKTGIYNSIHSPRKLPTDPFLDVVSFIFSHPHDGVIALIDSSSGTSISYAKLLPFVKSMASGLHKMGVLQGDLVLLLLPNSIYYPIVLLGVMYLGAVVTPLNPLSSVDEIRKREDTAAILFSSGTTGVSKGVVLTHRNLIAMVDVLERLEASRHEYSSSKNVCLAVLPMFHIYGLSLFATGLLSLGSTIVVMRKFDIDETIRAIDKYDVTHVYVVPPILSALTAKAKGVNGSKLQSLRQVGSSAAPLSTKVINDFVQAFPNVDLIQGYGMTESGALAACGFNTEKFHNYSSLGLLAPNMEAKVVDWNSGAFLPPGRSGELWLRGPSIMKGYLNNEEATISTIDKDGWLHTGDIVYFDQDGYLYLFDRLKEFIKYKGFQIPPADLEAVLILHPEIVDVAVTGAKDEEAGEIPVAFVVKKVGSVLSPKDVIDYTAKKVAPYKKVRKVVFIDKIPRKSSITRIVDYPSRLFCQCSTYMVYRSLLWGYCRWGSAIVVMGKFNIDEAIRVDDKYIVTHFDVVPPMLMALTKKAKGVNVAPFKKVRRVAFTDKIPRSAAGKILQKQRRNFLTSKK 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01279 590 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 133 - -
Mepo5g01279 590 Gene3D Luciferase; Domain 3 310 388 - -
Mepo5g01279 590 FunFam Long-chain-fatty-acid--CoA ligase FadD 132 390 - -
Mepo5g01279 590 Gene3D - 389 478 IPR045851 -
Mepo5g01279 590 SUPERFAMILY Acetyl-CoA synthetase-like 53 477 - -
Mepo5g01279 590 Gene3D - 479 566 - -
Mepo5g01279 590 ProSitePatterns Putative AMP-binding domain signature. 140 151 IPR020845 -
Mepo5g01279 590 CDD 4CL 36 477 - -
Mepo5g01279 590 Gene3D - 26 131 IPR042099 -
Mepo5g01279 590 Gene3D - 132 156 - -
Mepo5g01279 590 Pfam AMP-binding enzyme C-terminal domain 405 477 IPR025110 -
Mepo5g01279 590 Gene3D - 157 306 - -
Mepo5g01279 590 Pfam AMP-binding enzyme 130 395 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01279 Mepo-Chr5 12990228 12995578 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01279 501 588 Monolignol Biosynthesis Gene Families AT4G19010 40.909 6.96e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01279 K01904 - mnt:21399895 583.948