Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01276 ATGGCTGCAAATTTCAACTGTGACATGCCACAAAATACCATCACTCAGCCTCATTGGTATTCATCAAAAACCGGAATTTACAATAGTATACACTCTCCTAGGAGCCTTCCGACCGACCCTTTTCTCGATGTTGTATCATTCATTTTTTCTCACCCTCATGATGGGGTTTTAGCCCTTATTGATTCCTCATCTGGGTCTTCCATTTCTTACTCAAAGTTGTTACCATTAGTCAAATCAATGGCTTCTGGTCTTCACAAAATGGGTGTATCACGAGGTGATGTCGTTTTGCTTTTACTTCCAAATTCAATTTACTATCCCATTGTAACATTAAGTGTTATGTATCTAGGTGCTGTTTTCACACCGTTGAATCCTCTTAGTAGTTTTGATGAAATTCGTAAGCGAGTTAATGACTGTGGTGTGAGTTTTGCTTTTACTATACCTGAAAATGCTAAGAAATTAGAACCATTAGGCATTCCTATTGTTTCTGTGCCAGAAAATGAAAAGGATTTGAAGCACGATTGTTTCTCGTGTTTTTTTAACCTGATTTCTGGTAACATTGTTTTGCCTCAAAAGCCGGTTATTAAACAAGAAGACACTGCTGCTATATTGTTTTCTTCTGGTACTACTGGTGTGAGCAAAGGAGTTGTTTTAACTCATAGAAATCTTATTGCTATGGTTGATGTTTTGGAGAGGTTGGAAGCTTCTCGATATGAATACTCTAGTTCCAAAAATGTGTATCTAGCTGTTTTGCCGATGTTCCATTTATACGGTTTATCGCTCTTTGCTACGGGATTATTGTCATTGGGTTCTACAATCGTTGTAATGCGAAAATTTGACATTGATGAGACTATTAGGGTGATCGATAAATATAATGTTACACACTTTCATGTTGTTCCACCGATATTGACGGCATTGACAGCGAAGGCAAAGGGTGTAAATGGAAGTAAGTTGCAGAGTTTGAGACAGGTCGGTTCTAGTGCAGCGCCTTTAACCACAAAAGCTATAAATGATTTTGGCCAAGCTTTCCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAGTTGGGTGCATTAGGAGCATGTGGTTTCAATACTGAAAAGTTTCACAACTATTCTTCACTAGGGTTGTTAACGCCAAACATGGAGGCAAAAGTGGTAGATTGGAAAAGTGGTGCTTTTTTGCCCCCAGGCAGAAGTGGTGAGCTTTGGTTGAGAGGGCCTTCAATTATGAAAGAATACTTGAATAATGAGGAAGCTACAATGTCAACAATTGATAAAGATGGTTGGCTACATACTGGAGATATTGTTTATTTTGATCAAGATGGATATTTATATTTGTCTGACCGCTTGAAAGAATTTATCAAATACAAGGGCTTTCAGATTCCTCCTGCTGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATTGTTGATGTCGCTGTTACAGGTGCCAAGGATGAAGAAGCTGGGGAGATTCCAGTGGCATTTGTGGTCAAGAAGGTTGGGAGTGTACTTTCTCCAAAGGATGTTATCGATTTCGTTGCTAAGCAGGTTGCTCCATTCAAGAAGGTTCGCAAAGTGGTCTTCACCAACAAGATTCCGAGGTCTGTGACTGGGAAGATCCTCCGAAAGCAACTCAGAAACTGCTTGCCTTCTAAACTCTAA 1668 0.3921 MAANFNCDMPQNTITQPHWYSSKTGIYNSIHSPRSLPTDPFLDVVSFIFSHPHDGVLALIDSSSGSSISYSKLLPLVKSMASGLHKMGVSRGDVVLLLLPNSIYYPIVTLSVMYLGAVFTPLNPLSSFDEIRKRVNDCGVSFAFTIPENAKKLEPLGIPIVSVPENEKDLKHDCFSCFFNLISGNIVLPQKPVIKQEDTAAILFSSGTTGVSKGVVLTHRNLIAMVDVLERLEASRYEYSSSKNVYLAVLPMFHLYGLSLFATGLLSLGSTIVVMRKFDIDETIRVIDKYNVTHFHVVPPILTALTAKAKGVNGSKLQSLRQVGSSAAPLTTKAINDFGQAFPNVDFIQGYGMTELGALGACGFNTEKFHNYSSLGLLTPNMEAKVVDWKSGAFLPPGRSGELWLRGPSIMKEYLNNEEATMSTIDKDGWLHTGDIVYFDQDGYLYLSDRLKEFIKYKGFQIPPADLEAVLILHPEIVDVAVTGAKDEEAGEIPVAFVVKKVGSVLSPKDVIDFVAKQVAPFKKVRKVVFTNKIPRSVTGKILRKQLRNCLPSKL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01276 555 Gene3D - 34 452 IPR042099 -
Mepo5g01276 555 Pfam AMP-binding enzyme C-terminal domain 467 541 IPR025110 -
Mepo5g01276 555 CDD 4CL 36 547 - -
Mepo5g01276 555 FunFam Long-chain-fatty-acid--CoA ligase FadD 32 452 - -
Mepo5g01276 555 Pfam AMP-binding enzyme 56 457 IPR000873 -
Mepo5g01276 555 FunFam 4-coumarate--CoA ligase 2 453 554 - -
Mepo5g01276 555 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Mepo5g01276 555 SUPERFAMILY Acetyl-CoA synthetase-like 55 550 - -
Mepo5g01276 555 Gene3D - 453 552 IPR045851 -
Mepo5g01276 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01276 Mepo-Chr5 12978219 12980756 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01276 1 551 Monolignol Biosynthesis Gene Families AT4G19010 57.782 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01276 K01904 - gmx:100804808 834.328