Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01273 ATGATGGAAAGTGGAGGGAGAGGAGGAATTGAAGGGTATGATGGAATGATGATGACGATGACAAGAGACCCAAAGCCGAGGCTGAGGTGGACAACCGATCTTCACGACCGCTTTGTCGACGCTGTCACAAAGCTTGGTGGCCCTGACAAGGCGACTCCTAAGTCTGTTCTAAGGTTAATGGGATTAAAAGGTTTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAACATGCTCGAAAACAAAATGAAGAACAATTCAAAGAGAATAACAGATGTTCGTATGTAAATTTCAGTAACCATTCTTCAGGGACTAATACCGACTATGGAGGTGATAATGAAGGGGGAGAAATTCCAATAGGAGAAGCACTGAGGCAACAAATTGAAGTTCAAAAGAGATTGGAAGAACAACTTGAGGTGCAAAATAAATTGCAAATGAGAATAGAGGCTCAAGGAAAGTATTTGCAGGCAGTGTTAGAGAAAGCACAAACAAGCCTTCCTCAAGATGGACTAGGTAATCTTGATGCATCAAAAGCTCAATTGGCTGAATTCAACTCAGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGTAAAGAAAACATACTAGACATCAATGAACTCTATAATAAGAATCATGCCCCAACTTTCAATTATCAAGAAGTACTAGGGACAGAAGAAAATAAGGAACTAAAACCTCAGGTTGAAGGGGGTGCAATACAGCTAGACTTAAACATTAAAGGTGGCAATGAACTTGTATCTGTAGATGGAGCTGAAATGGAATCCAATATGGTTTCATATAGAGTATACCATTTTTGA 834 0.3873 MMESGGRGGIEGYDGMMMTMTRDPKPRLRWTTDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQHARKQNEEQFKENNRCSYVNFSNHSSGTNTDYGGDNEGGEIPIGEALRQQIEVQKRLEEQLEVQNKLQMRIEAQGKYLQAVLEKAQTSLPQDGLGNLDASKAQLAEFNSALSNFMENMNKDSKENILDINELYNKNHAPTFNYQEVLGTEENKELKPQVEGGAIQLDLNIKGGNELVSVDGAEMESNMVSYRVYHF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01273 277 FunFam Myb family transcription factor 24 82 - -
Mepo5g01273 277 NCBIfam myb-like DNA-binding domain, SHAQKYF class 25 80 IPR006447 GO:0003677
Mepo5g01273 277 SUPERFAMILY Homeodomain-like 25 81 IPR009057 -
Mepo5g01273 277 Coils Coil 135 155 - -
Mepo5g01273 277 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 82 IPR017930 -
Mepo5g01273 277 Pfam Myb-like DNA-binding domain 28 78 IPR001005 -
Mepo5g01273 277 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 221 IPR044848 GO:0003700
Mepo5g01273 277 Gene3D - 24 82 - -
Mepo5g01273 277 Pfam MYB-CC type transfactor, LHEQLE motif 123 168 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01273 Mepo-Chr5 12944732 12947833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01273 18 194 G2-like Transcription Factor Family AT3G24120 53.005 1.09e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo5g01273 Myb_DNA-binding 2.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01273 - - mtr:11409568 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01273 5 12944732 12947833 Mepo5g01273 5 12944732 12947833 ECH