Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01260 ATGTTGCAATGCATAACTTGTGCCAAGCAAACATCAGAAGATGGGGATGAACAAGTTCAGCAGAGAGGCACATCAACCACCAGAGAAGCCCCCAAAAATCTGTCTGCGCAGATAAAGGATATTGTACTGAAGTTTAAAGGTGTCTGCACAAAAGGATCCACCAGTTCCTACAAAAGAGGACTGAGATCATCTGCTGCTAACTCTGAAGTCAATTCTGAGATTCAATACCCTTATATGGGAGGTGTGAGCTTAGGTTCAACTCCTCCTTGGGACCTGCCTGTCAACTTCACTGGTGGAAGATCTGATCAAAGGTTTATAGGGGGAACTAGTGGTAACCAAACTCCTACCGTGCAAGAGCCGGTTGTAGCGGAACCTGAGGCTGCGGTGGAGGAAGACAAAGAGTGGGTGGCTCAGGTGGAACCAGGAGTTGATGTTACCTTTCTGTCTCTTCCTGATGGTGGAAATGATCTCAAGAGAATTCGCTTCAATCGAGAAATCTTTGATAAGATGCAAGCTAGAGTATGGTGGGGTGAGAATTTTGACAGACTCAAAGAGCTTTATAATGTCCGGAGTTTCAATGGTCAAGCTCTTAGCACTGCTCTACCATCTGAGGATGAGCAAAGAGAAGCTTCTCTCTCAATGCATCAGACTGGAAGTGGAAGCAATGTGGCTGCTTGGGTGAACAATGATACAATGCTGGAGAATCAGTACTTTAATCCTTCAGGATTCACTATGGGTGAGGGAAGCAGTAGCCACCAAAACATGCATGCAGCTGGGTCATCCATGCAAGCATTAAGGTCTTCTTCTATGAATGAAATTTCCTTCAGCAATTCTAGTGACCCTGACTCAGAATGGATTGAGCAAGTTGAGCCTGGAATATTTGTCACAGTCAGGCAGTATCCTGATGGGAACAATGAGCTTAGACGTATCAAATTCAGCCGACAGAGGTTTGGAGATGCAGAGGCAAGGAAATGGTGGGACGAGAACAGAGATAGACTTCGAGAACAATACCTGCAGTGA 1020 0.4549 MLQCITCAKQTSEDGDEQVQQRGTSTTREAPKNLSAQIKDIVLKFKGVCTKGSTSSYKRGLRSSAANSEVNSEIQYPYMGGVSLGSTPPWDLPVNFTGGRSDQRFIGGTSGNQTPTVQEPVVAEPEAAVEEDKEWVAQVEPGVDVTFLSLPDGGNDLKRIRFNREIFDKMQARVWWGENFDRLKELYNVRSFNGQALSTALPSEDEQREASLSMHQTGSGSNVAAWVNNDTMLENQYFNPSGFTMGEGSSSHQNMHAAGSSMQALRSSSMNEISFSNSSDPDSEWIEQVEPGIFVTVRQYPDGNNELRRIKFSRQRFGDAEARKWWDENRDRLREQYLQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01260 339 MobiDBLite consensus disorder prediction 200 220 - -
Mepo5g01260 339 Pfam Transcription factor regulating root and shoot growth via Pin3 283 337 IPR013591 -
Mepo5g01260 339 Pfam Transcription factor regulating root and shoot growth via Pin3 133 187 IPR013591 -
Mepo5g01260 339 MobiDBLite consensus disorder prediction 12 31 - -
Mepo5g01260 339 ProSiteProfiles BRX domain profile. 133 188 IPR013591 -
Mepo5g01260 339 ProSiteProfiles BRX domain profile. 283 338 IPR013591 -
Mepo5g01260 339 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 338 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01260 Mepo-Chr5 12816956 12821444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01260 1 338 Major Intrinsic Protein MIP AT1G31880 43.213 2.81e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01260 - - mtr:11415593 612.068