Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01259 ATGGAGAGGTACAAAATAATCAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAGTAAGCAAACCAGTGAAGTTGTTGCGATCAAGAAAATGAAGAAGAAATATTACTCCTGGGAGGAGTGTGTAAATCTAAGAGAAGTCAAGTCTTTACGAAAAATGAACCACCCAAATATTGTGAAACTGAAGGAAGTTATTCGAGAAAGCGACATTTTGTACTTTGTTTTTGAGTACATGGAGTGCAACCTATACCAACTTATGAAAGACAGGGAAAAACTGTTCTCTGAAGGTGAAATTAGAAACTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCATCAGCGTGGTTACTTCCATCGTGACCTTAAACCTGAAAACTTGCTGGTTACTAAGGATGTTATCAAAATCGCTGATTTTGGCCTTGCACGAGAGATCAATTCACTACCACCCTACACTGAATATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTTGTATCTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTCTCTCTCCGACCTCTTTTTCCAGGAGCCAGCGAGGCAGATGAAATCTACAAAATATGTGGTGTGATAGGCAATCCGACCACTGAATCATGGGCCGATGGACTCAAACTTGCAAGGGATATTAATTATCAGTTTCCACAGCTTGCTGGCGTAAATCTTTCTGCTTTGATCCCATCTGCAAGTGATCATGCAATCAGCCTTATCCAATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTTAGAGGCCCTTCAGCATCCTTTCTTCCAGAGCTGCTTTTATATCCCCCCATCTCTTCGCTCCAGGGCAGTAGCGAGAACTCCTCCACCTGCTGGAACCAGGGGAGCACTGGATCAGCAAGGGGTCAAGAGGTATCCCGGTGCTTTACCCAGTTCAAAGCCCACCAACTATTTTTCATCTCCGAAAGTTCAGCCTTCTTCAGGTGTTCAACGGAAGCTGGATATGGTAAATCAGGATGGAATTAAGAATGAAAAATCAATGAAGACTACTACACAATCGAAATATCGGCACCCAGGAAAGGAAAGTCCAACTTCTGTGATTAAAGAAAGAACTACACATGAGATTTCAGAAACAGCCGAGAGGTTGGCCAATATGTCTATTGGTAATCGAAGACAATCCATGGGGCAACCCCGGCCTCCTCCCATGAAAGCTGGAGTCAATTGGAGTTCTGAATCTCCTAACTTCATGTTCAGGCCTGCACCACAGATTCAGACCGGAAGAACATACACAAGAAAAGTTGCTGGATGA 1350 0.4407 MERYKIIKEVGDGTFGSVWRAISKQTSEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSEGEIRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDVIKIADFGLAREINSLPPYTEYVSTRWYRAPEVLLQSCIYSSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGNPTTESWADGLKLARDINYQFPQLAGVNLSALIPSASDHAISLIQSLCSWDPCKRPTALEALQHPFFQSCFYIPPSLRSRAVARTPPPAGTRGALDQQGVKRYPGALPSSKPTNYFSSPKVQPSSGVQRKLDMVNQDGIKNEKSMKTTTQSKYRHPGKESPTSVIKERTTHEISETAERLANMSIGNRRQSMGQPRPPPMKAGVNWSSESPNFMFRPAPQIQTGRTYTRKVAG 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01259 449 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Mepo5g01259 449 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Mepo5g01259 449 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Mepo5g01259 449 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Mepo5g01259 449 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01259 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Mepo5g01259 449 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01259 449 MobiDBLite consensus disorder prediction 421 443 - -
Mepo5g01259 449 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 346 - -
Mepo5g01259 449 MobiDBLite consensus disorder prediction 298 386 - -
Mepo5g01259 449 MobiDBLite consensus disorder prediction 326 347 - -
Mepo5g01259 449 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01259 449 MobiDBLite consensus disorder prediction 399 449 - -
Mepo5g01259 449 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Mepo5g01259 449 MobiDBLite consensus disorder prediction 363 386 - -
Mepo5g01259 449 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Mepo5g01259 449 CDD STKc_MAK_like 4 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01259 Mepo-Chr5 12804574 12809150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01259 1 290 Core Cell Cycle Gene Families AT3G48750 37.919 9.00e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Mepo5g01259 Pkinase 1.2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01259 K08829 - gmx:100810150 788.875