Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01250 ATGGAGTCCTCCAGTGAGCATGAAAGGTTGTCAGTTAGAGAGGTTCATGCCAATGGAAGTCGCATGGCTACATCAGAAGTTGAGGCTAAGCTTGATGAAGGAAATATTCAAGAAGCAGAATCTGCATTGCGAGAAGGGTTGTCGCTCAATTTTGAGGAAGCAAGGGCTCTTCTTGGGAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTGCTCTTCGTGTCTTTGATGGGATCGATCTCCATGCTGCCATCCAACGGTTGCAACCCTCGTTTTCTGAAAAATCACCTGTTAAAAAAGGTCGTACTCGCACAGAATCACCTTCTTCAGTCTCTCAGCATGCTGCTACTTTGGTGCTTGAAGCCATCTACTTAAAAGCCAAGTCTCAACAAAAACTGGGGAAATTTGCTGAAGCTGCTAATGACTGTAAACGTATTCTTGATGCTGTTGAGAAGATATTTTATCAGGGCATACCTGATTTTCAAGTGGACGGTAAACTGCAAGAGATAGTCAGCCATGCAGTAGAGCTCCTTCCAGAGCTTTGGAAACAAGGAGGTTGCTATGACGAGGCAATCTCTGCTTATAGGCGTGCCCTTCTTAGTCAATGGAACCTTGATAATGATTGCTCTTCAAGAATTCAGAAATCATTTGTTGTTTTTCTGCTGTACAGTGGTGTGGAGGCAAGTCCGCCTAGTTTAGCAGTTCAGATTGATGGTTCTTATGTGCCTAAAAATAATCTCGAAGAGGCCATTTTGCTTTTAATGATTCTTATAAGAAAGTTTGGTCATGGTAAGATAAAATGGGATCCTTCAATCATGGAGCACCTAACTTTTGCACTTTCCGTATGTAGCCAAACTTCGGTTTTAGCAATGCAATTTGAAGACTTGATGCCTGGAGTATACCATCGTATCGATCGTTGGAATTCTTTAGCTTTATGTCATTGTGCTGCCGGACAAAATGTCAGTGCTTTGAATCTGCTAAGGAAGTCCTTGCACAAACACGAACGACCAGATGACCTTACATCGTTATTATTAGCTTCTAAGATCTGCAGTGAGAGTACCTATCTTGCCGGTGAGGGAGTCAGCCATGCGCAGAGGGCAATCAAGAATGCTCATGGTCCAAATGAGCATTTAAAGGGTGTTGCTCTTCGCATGTTGGGACTTTGTCTTGGAAAGCAAGCTAAAGTTGCTTCCTCTGACTTCGAGAGGTCTCGGTTTCAGTCCAAAGCTCTGGAGTCATTGGAAGAGGCAACTAGATTGGAGAAAAATACTTATCTGATTTTTGAGTTGGCGATTCAGTACGCTGAGCACCGTAATCTGACCGCTGCTTTGCGGTCTGCACGGCATTTCATCAACGAAACTGGTGGCTCAATAGTGAAAGCTTGGATATTGCTTGCTCTGATTTTGTCGGCACAACAAAGATTTCCAGAAGCTGAAGTGGTGACAGATGCTGCTTTAGATCAGACTGTGAGATGGGAGCAGGGGCCTCTGCTTAAGCTTAAAGCGAAGCTGAAGATTGCCCAATCAAAACCGATGGATGCCATCGAAACCTATCGCTACCTTCTTGCATTGGTTCAAGCCCAGAGGAAATCCTTTGGGTCTTTCCAAATTAGTTCGAAGGTTGAAGATGATAAAGTTAATGAATTTGATATTTGGCATGGTCTTGCAAGTTTATATGCCAGCCTTTCTCGTTGGAAGGATGCTGAAATCTGTTTGCAAAAGGCCAGAGAGTTGAAGGAGTACTCTGCAGAAATTCTGCGCACTGAAGGTATTTTGTTTGAAGGACGCGGGCAAAATCAAGAAGCTCTCAACGCTACTATTAATGCTATACTACTTGAACCAAACCATGTTCCAAGCAAAATCTTAATGAGTGCTTTGATTCATAAAATGGGCTCAAAGGCTTTGCCTGCTGCTGCGAGAAGCATGCTGTCTGATGCGCTTAGAATAGAACCGACCAATCGTATGGCTTGGTATTACTTGGGATTAATTCACAAGCACGATGGCCGAATGGGTGATGCTGCGGACTGCTTCCAGGCAGCTACCATGCTGGAAGAATTTGATCCCATCGAAAGTTTCAGCACCATACTTTGA 2088 0.4377 MESSSEHERLSVREVHANGSRMATSEVEAKLDEGNIQEAESALREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLHAAIQRLQPSFSEKSPVKKGRTRTESPSSVSQHAATLVLEAIYLKAKSQQKLGKFAEAANDCKRILDAVEKIFYQGIPDFQVDGKLQEIVSHAVELLPELWKQGGCYDEAISAYRRALLSQWNLDNDCSSRIQKSFVVFLLYSGVEASPPSLAVQIDGSYVPKNNLEEAILLLMILIRKFGHGKIKWDPSIMEHLTFALSVCSQTSVLAMQFEDLMPGVYHRIDRWNSLALCHCAAGQNVSALNLLRKSLHKHERPDDLTSLLLASKICSESTYLAGEGVSHAQRAIKNAHGPNEHLKGVALRMLGLCLGKQAKVASSDFERSRFQSKALESLEEATRLEKNTYLIFELAIQYAEHRNLTAALRSARHFINETGGSIVKAWILLALILSAQQRFPEAEVVTDAALDQTVRWEQGPLLKLKAKLKIAQSKPMDAIETYRYLLALVQAQRKSFGSFQISSKVEDDKVNEFDIWHGLASLYASLSRWKDAEICLQKARELKEYSAEILRTEGILFEGRGQNQEALNATINAILLEPNHVPSKILMSALIHKMGSKALPAAARSMLSDALRIEPTNRMAWYYLGLIHKHDGRMGDAADCFQAATMLEEFDPIESFSTIL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01250 695 MobiDBLite consensus disorder prediction 1 15 - -
Mepo5g01250 695 Pfam Tetratricopeptide repeat 635 679 - -
Mepo5g01250 695 ProSiteProfiles TPR repeat profile. 582 615 IPR019734 GO:0005515
Mepo5g01250 695 SMART tpr_5 458 491 IPR019734 GO:0005515
Mepo5g01250 695 SMART tpr_5 582 615 IPR019734 GO:0005515
Mepo5g01250 695 SMART tpr_5 119 152 IPR019734 GO:0005515
Mepo5g01250 695 SMART tpr_5 653 686 IPR019734 GO:0005515
Mepo5g01250 695 SMART tpr_5 548 581 IPR019734 GO:0005515
Mepo5g01250 695 SMART tpr_5 303 336 IPR019734 GO:0005515
Mepo5g01250 695 SUPERFAMILY TPR-like 496 681 IPR011990 GO:0005515
Mepo5g01250 695 Gene3D Tetratricopeptide repeat domain 240 533 IPR011990 GO:0005515
Mepo5g01250 695 Gene3D Tetratricopeptide repeat domain 20 213 IPR011990 GO:0005515
Mepo5g01250 695 SUPERFAMILY TPR-like 54 486 IPR011990 GO:0005515
Mepo5g01250 695 PANTHER PROTEIN NPG1 5 692 IPR043376 -
Mepo5g01250 695 MobiDBLite consensus disorder prediction 1 25 - -
Mepo5g01250 695 Gene3D Tetratricopeptide repeat domain 534 687 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01250 Mepo-Chr5 12716579 12722471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01250 12 695 Calmodulin-binding Proteins AT2G43040 70.058 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01250 K21843 - gmx:100814609 1133.63