Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01246 ATGGTTGTGTACAGTGGCAACGTGAGATCGAAGAGGAAAAAGGAAATTGAAGTTAAACTAAAGGAATTCAATCTCATGAACAATAGCTTTCATGGAGAAATTCCACAAGAGTTGGGTCGGTTGCTACAATTGCAGCAACTTTTACTCAGCAATAACTCTCTTGTCGGAGAAATTCCTACAAACCTCACATATTGCTCCAACCTCAAAGACTTGTATTTGGGAGGGAACAATTTGATTGGCAAGATTCCAATTGAAATTGGCTCTTTGAAAAAACTTCAATCATTGGCCATTTGGAAAAATAAATTAACTGGAGGAATCCCTTCATTCATAGGGAATCTTTCAAGCTTAACAGATTTTTCATTTGCATATAACAACTTAGAAGAAGATATTCCACAAGAAATATGTCACCTCAAAAGCTTGACAATTTTAAATTGGGGTGCGAACAATTTGTCTGGGGAGGTACCAACAAACGGTGTCTTTGGAAATGTAACCCATGTAGCAATGATTGGAAACAATAAGCTTTGTGGAGGTATTTCAGAGTTGCATCTGGCATCATGCCCTATCAACAGTAGGAAACATGCAACAAACCATAATTCCAGGTTGATAGCAGTGATAGTTAGTGTGATTACTTTTCTTATCGTACTTTCACTTATTATAATCATCAACTGGATGAAAAAAAGAAACCAAAAACCATCCTTTGATTCACCAACAATTGATCAACTGGCTAAAGTTTCATACCAAGAATTACATCAAGGAACCGATGGATTCTCAGATAAAAACTTGATTGGATCAGGAGGTTTCGGTTCTGTGTACAGAGGAAATCTTGTGTCGAAAGGTAATGTTGTTGCTGTGAAAGTCTTAAACCTCCAAAAGAACGGAGCTAGCAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAACATTAGACACCAAAACTCAGTTAAGGTTTTAACATGTTGTTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGATTTTAAATTCAGAGCATTCAAAAACATTGGACCTTGGTCATAGGTTAAACATCATTATCGATGTTACTTCTGCATTACATTATCTGCATCAAGAATGTGAGCAATTGATTATTCATTGTGATCTAAAGCCAAGCAATGTTCTTCTGAATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAACACTTGTCTCCGCCATTGGTGCATTATCAAACCAAACAGATCATTTTGCATTGCTCAAATTCAAAGAATCGATATCCAATTACCCAAATAAAGCTCTTGAATCTTGGAATTCTTCCATCCATTTCTGCAAGTGGTGTGGAATCACATGCAACCTCATGCATCAAAGAGTTACAGAGTTAAACTTAGAAGGATATCAATTACATGGATCAATATCACCCTATGTTGGCAATCTCACTTTTCTTACAAACTTCAATCTCATGAACAACAGCTTCCATGGAGAAATCCCACAGGAGTTGGGTAAGTTGATACATATGCAACAACTTTATCTCACCAATAACTCGTTTACGGGAGAAATTCCTACAAACTTAACAAATTGCTCCAATCTCAAAGGCTTGCATTTGGGAGGGAATGATTTGATTGGCAAAATACCAATTGAAATTGGCTCTTTGAAAAAGCTTCAATCGCTCGATGTTTGGATGAACAATTTAACTGGAGGAATCCCTTCATTCATAGGGAATCTTTCACGCTTAACCAATTTTGCAATTTTGTTTAACCACTTCGAGGGAGATATTCCACAAGAAATATGTCGCCTCAAAAGCTTGACAATTTTAAATTTTGGTGTGAACAACTTGTCGGGTACGATTCCTTCTTGTTTTTACAACATCTCATCAATTACTAAGCTCACACTAACAATGAATAACTTTCATGGTTCTCTTCCACCCAACATGTTCCACAAACTCCACAATCTCCAATTTTGTGCAATTGGGGGAAATCAATTGTCAGGTCCAATCCCCGCTTCCATAACAAATGCATCTTCTGCCATTACACTAATTGATATAAGTCAAAACCAATTTGTCGGACAAGTTCCAACGTTGGGAAGGCTAAAAGATCTATTATTGCTAAATTTGGAAGTCAACAATCTAGGTGACAATTCAACGAAGGATTTGGACTTTTTAAAATCTTTGGCAAATTGTAGTAAGTTGCAAGTGTTTTCTATATACCATAATAATTTTGGAGGCATTCTGCCAAGTTCTATAGGCAATTTATCCCCTGGACTTATTGAACTATATCTTGGGAATAATCAGATATCAGGAAAAATTCCTTCAGAATTGGGCAATTTAATTGGCTTAACTCTCCTGAGAATGGAAAATAACCACTTTGAAGGAATTATTCCAGCTACTTTTGAGAAGTTCCAAAAGATGCAACAGTTAACATTGAATGGCAACGAGTTGTCAGGAGATATACCACCCTTTATAGGCAATCTCAGCCTATTGTTTTGGTTGAATTTACGTCATAATAGGTTTGAAGGAAGTATTCCTCGAAGCATAGGAAACTGCAAACATTTACAATATTTAAATCTTGCACAAAATAAGCTTAGAGGAATCATACCCTTAGATATTTTTAATCTTTTTTCTTTATCAAACTTATTGGACTTGTCGGATAACTTTTTGAGTGGTAGATTGCCAAGAGAAGTGAGAATGCTAAAAAATATTAATGTGCTAGATGTCTCTGAAAATCATTTGTTAGGTGATATTCCTATAACCATTGGTGAATGCATAACCTTGGAATACCTTTTTTTGCAAGGGAACTCCTTCAATGGAACAATACCGTCCTCTTTGGCTTCGCTCAAAGGTCTTCTATATTTAGACCTTTCTAGAAATCAATTGTACGGATCAATTCCTAATGATATGCAGAATATCTCTGGTTTAGAACACTTGAATGTTTCTTTTAACATGTTGGAAGGTGAGATACCAACAAACGGTGTCTTTCGAAATGCAACCCAAGTAGCAATGATTGGAAACAATAAGCTTTGTGGAGGTATTTCAGAGTTGCATCTGCCATCATGCCCTATCAAGGGTAGAAAACATGCAACAAACCATAATTTCAGGTTGGTATCAGTGATAGTTAGTGTGGTTTCATTTCTTATCATATTTTCATCTATTATAATTATCACCTGGATGAAAAAAAGAAACCAAAAACCATCTCTTGATTCACCAACAATTGATCAACTAGCTAAAGTTTCATTCCAAGAGTTACATCAAGGAACTGATGGGTTCTCGGATAAAAACTTGATTGGATCAGGAAGTTTTGGTTCTGTGTATAGAGGAAATCTTGTGTCTGAAGATAATGTTGTTGCTGTGAAGGTCCTAAACCTCCAAAAGAATGGAGCTCACAAGAGTTTTATTGTTGAATGTAATGCACTCAAAAACATTAGACACCGAAACTTAGTTAAGGTTTTAACATGTTGTTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAGTGGTTGCATCCTGAGATTTTAAATTCAGAGCATCCAAAAACATTGGACCTAGGTCATAGGTTAAACATCATTATCGATGTTGCTTCTGCATTACATTATCTGCATCAAGAATGTGAGCAATTGATTATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGACAACATGGTTGCTCATGTGAGTGATTTTGGTATAGCAAAACTGGTCTCGACCATCGGTGGTACCTCTCATAAGAATACTAGCACAATTGGGATAAAAGGAACCGTTGGCTATGCTCCTCCAGAGTACGGAATGGGTGCTGAAGTGTCTACATGTGGTGACATGTATAGCTTTGGAATCCTTGTGTTGGAAATGCTTACCGGTAAAAGACCCACTGATGAAGTTTTTCGAGATGGTCAAAATCTGCATAACTTTGTTGGAATTTCATTTCCTGATAATCTTAAAACGATTTTGGACCCAGATATTACATCAAGAGATGTAGAAGTAGCACTAGAAGATGAAAACAATGAGAATTTTATTCCAAGTGAAGAAGAGTGCTTAGTTTCCCTTCTTAGGATTGGACTTATTTGTTCAATGGAATCACCTAAAGAAAGAATGAATATTGTGGATGTCACTAGAGAGCTTAGCATAATCAGAAAGGCATTTTTCGTAGGTGTTCACACTCATAAGTAA 4242 0.3616 MVVYSGNVRSKRKKEIEVKLKEFNLMNNSFHGEIPQELGRLLQLQQLLLSNNSLVGEIPTNLTYCSNLKDLYLGGNNLIGKIPIEIGSLKKLQSLAIWKNKLTGGIPSFIGNLSSLTDFSFAYNNLEEDIPQEICHLKSLTILNWGANNLSGEVPTNGVFGNVTHVAMIGNNKLCGGISELHLASCPINSRKHATNHNSRLIAVIVSVITFLIVLSLIIIINWMKKRNQKPSFDSPTIDQLAKVSYQELHQGTDGFSDKNLIGSGGFGSVYRGNLVSKGNVVAVKVLNLQKNGASKSFIVECNALKNIRHQNSVKVLTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPEILNSEHSKTLDLGHRLNIIIDVTSALHYLHQECEQLIIHCDLKPSNVLLNDDMVAHVSDFGIATLVSAIGALSNQTDHFALLKFKESISNYPNKALESWNSSIHFCKWCGITCNLMHQRVTELNLEGYQLHGSISPYVGNLTFLTNFNLMNNSFHGEIPQELGKLIHMQQLYLTNNSFTGEIPTNLTNCSNLKGLHLGGNDLIGKIPIEIGSLKKLQSLDVWMNNLTGGIPSFIGNLSRLTNFAILFNHFEGDIPQEICRLKSLTILNFGVNNLSGTIPSCFYNISSITKLTLTMNNFHGSLPPNMFHKLHNLQFCAIGGNQLSGPIPASITNASSAITLIDISQNQFVGQVPTLGRLKDLLLLNLEVNNLGDNSTKDLDFLKSLANCSKLQVFSIYHNNFGGILPSSIGNLSPGLIELYLGNNQISGKIPSELGNLIGLTLLRMENNHFEGIIPATFEKFQKMQQLTLNGNELSGDIPPFIGNLSLLFWLNLRHNRFEGSIPRSIGNCKHLQYLNLAQNKLRGIIPLDIFNLFSLSNLLDLSDNFLSGRLPREVRMLKNINVLDVSENHLLGDIPITIGECITLEYLFLQGNSFNGTIPSSLASLKGLLYLDLSRNQLYGSIPNDMQNISGLEHLNVSFNMLEGEIPTNGVFRNATQVAMIGNNKLCGGISELHLPSCPIKGRKHATNHNFRLVSVIVSVVSFLIIFSSIIIITWMKKRNQKPSLDSPTIDQLAKVSFQELHQGTDGFSDKNLIGSGSFGSVYRGNLVSEDNVVAVKVLNLQKNGAHKSFIVECNALKNIRHRNLVKVLTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPEILNSEHPKTLDLGHRLNIIIDVASALHYLHQECEQLIIHCDLKPSNVLLDDNMVAHVSDFGIAKLVSTIGGTSHKNTSTIGIKGTVGYAPPEYGMGAEVSTCGDMYSFGILVLEMLTGKRPTDEVFRDGQNLHNFVGISFPDNLKTILDPDITSRDVEVALEDENNENFIPSEEECLVSLLRIGLICSMESPKERMNIVDVTRELSIIRKAFFVGVHTHK 1413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01246 1413 ProSiteProfiles Leucine-rich repeat profile. 861 882 IPR001611 GO:0005515
Mepo5g01246 1413 FunFam LRR receptor-like serine/threonine-protein kinase EFR 226 337 - -
Mepo5g01246 1413 SUPERFAMILY Protein kinase-like (PK-like) 230 419 IPR011009 -
Mepo5g01246 1413 SUPERFAMILY L domain-like 424 721 - -
Mepo5g01246 1413 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 464 730 - -
Mepo5g01246 1413 Pfam Leucine rich repeat N-terminal domain 426 464 IPR013210 -
Mepo5g01246 1413 FunFam LRR receptor-like serine/threonine-protein kinase EFR 731 1035 - -
Mepo5g01246 1413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Mepo5g01246 1413 Pfam Protein kinase domain 257 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01246 1413 Pfam Protein kinase domain 1100 1324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01246 1413 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 5 190 - -
Mepo5g01246 1413 SMART LRR_typ_2 980 1005 IPR003591 -
Mepo5g01246 1413 SMART LRR_typ_2 787 810 IPR003591 -
Mepo5g01246 1413 SMART LRR_typ_2 835 859 IPR003591 -
Mepo5g01246 1413 SMART LRR_typ_2 113 137 IPR003591 -
Mepo5g01246 1413 SMART LRR_typ_2 956 979 IPR003591 -
Mepo5g01246 1413 SMART LRR_typ_2 515 539 IPR003591 -
Mepo5g01246 1413 SMART LRR_typ_2 908 932 IPR003591 -
Mepo5g01246 1413 SMART LRR_typ_2 563 587 IPR003591 -
Mepo5g01246 1413 SMART LRR_typ_2 41 65 IPR003591 -
Mepo5g01246 1413 ProSiteProfiles Protein kinase domain profile. 1099 1406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01246 1413 Gene3D Ribonuclease Inhibitor 537 610 IPR032675 -
Mepo5g01246 1413 Gene3D Ribonuclease Inhibitor 611 733 IPR032675 -
Mepo5g01246 1413 Gene3D Transferase(Phosphotransferase) domain 1 338 428 - -
Mepo5g01246 1413 Gene3D Transferase(Phosphotransferase) domain 1 1181 1407 - -
Mepo5g01246 1413 ProSitePatterns Protein kinases ATP-binding region signature. 262 285 IPR017441 GO:0005524
Mepo5g01246 1413 Gene3D Ribonuclease Inhibitor 734 1030 IPR032675 -
Mepo5g01246 1413 ProSitePatterns Protein kinases ATP-binding region signature. 1105 1128 IPR017441 GO:0005524
Mepo5g01246 1413 ProSiteProfiles Protein kinase domain profile. 256 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01246 1413 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1181 1410 - -
Mepo5g01246 1413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1230 1242 IPR008271 GO:0004672|GO:0006468
Mepo5g01246 1413 FunFam LRR receptor-like serine/threonine-protein kinase EFR 1069 1180 - -
Mepo5g01246 1413 SMART serkin_6 1099 1406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01246 1413 SMART serkin_6 256 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01246 1413 Gene3D Phosphorylase Kinase; domain 1 237 337 - -
Mepo5g01246 1413 Gene3D Phosphorylase Kinase; domain 1 1080 1180 - -
Mepo5g01246 1413 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Mepo5g01246 1413 Pfam Leucine rich repeat 934 993 IPR001611 GO:0005515
Mepo5g01246 1413 Pfam Leucine rich repeat 789 848 IPR001611 GO:0005515
Mepo5g01246 1413 SUPERFAMILY L domain-like 20 178 - -
Mepo5g01246 1413 SUPERFAMILY Protein kinase-like (PK-like) 1073 1398 IPR011009 -
Mepo5g01246 1413 Gene3D Ribonuclease Inhibitor 429 536 IPR032675 -
Mepo5g01246 1413 Gene3D Ribonuclease Inhibitor 16 195 IPR032675 -
Mepo5g01246 1413 SUPERFAMILY L domain-like 764 1019 - -
Mepo5g01246 1413 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 735 1399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01246 Mepo-Chr5 12680528 12693789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01246 20 416 Receptor kinase-like Gene Family AT3G47570 42.791 4.76e-100 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo5g01246 Pkinase 4.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01246 - - gmx:100801459 1274.61