Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01240 ATGTCTCTTCTCAGCAGATTCTTCTACAAAAGACCCCCAGATGGTTTACTCGAATTCATTGACAGAGTTTACGTTTTCGATTCGTGTTTTTCTACTGAAGCATTACCAGATGGAATGTACCAGCTATATCTTCACGAAATCGTGACTGAATTACATGAAGAGTTTCCAGAATCATCCTTTCTAGCGTTTAATTTTCGCGACGGCGAAAAGCGAAGCAATTTCGCTGAATTAATGTGTGATTATGATGTTATTGTTATGGATTATCCAAAAAACTATGAGGGTTGTCCTCTTTTGCCACTTTCACTTGTTCAGCATTTTCTTCGTGTTTGTGAGAGTTGGCTTTTGCTTGGAAATCATCAAAATGTGATTTTGTTTCATTGTGAAAGAGGGGGTTGGCCACTTTTGGCTTTTTTGTTGGCAAGTTTGTTGATTTTTAGAAGGGTTCATAGTGGTGAGCGTAGGACACTTGAAATGGTTCATAGAGAAGCACCTAAGGGTTTGTTGCAATTGTTGTCACCTTTGAATCCACAGCCTTCGCAGCTTCGGTATATTCAATATGTCGCGAGGAGGAATATTGCGCCGGAGTGGCCTCCTCCTGAGAGAGCCTTGTCTTTGGATTGTGTCATTCTTAGGGGGATTCCTAGCTTTGATTCGTCTAATGGATGTAGGCCAATGTTTAGGATTTTCGGGAGGAATTTGCTTAGTAGAGGCGGACTTTCTACTCAGATGATTTATAATATGCATAAGAAGAAGAAGCATTTGAGGCATTATAGTCAGGTAGACTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGAGATGTGGTTCTGGAGTGTGTCCATTTGGATTTGGATCCGGAAAGGGAAGTGATGATGTTTCGTGTGATGTTCAATACGGCATTTATTCGATCCAATATACTAATGCTGAACACTGAAAACTTGGACATTCTTTGGGATTCGAAGGAGCGGTATCCGAAAGGCTTCAGGGCTGAGGTTTTATTTGGGGAGGTTGAAAACATTAGTCCTCAGAGAGCTCCGACGGAAACAGCCATTTTGAATGGTGAGGAGAAAGGTGGATTACCTATTGAAGCATTTTCAAGAGTTCAAGAACTTTTTAGTGGAGTGGAATGGGTTGACAGTGGTGATGCTGCAGCAGTGTGGCTGCTTAGACAGCTTACTGTCTTAAATGAAGCCAAAGAGTTTTCGAGGATGCAAGGTAAAGGAAGTTGGTTTTCGTCACCAGCTGACTCTGAAGAAGAAAATAATGGATCAAGTGTTGCTGATAGTTCAGATGAAGCCTTTGATGTTACTCCCAAATCTTCTGCCGTTCCTTCAAAATTATTGACATCCGACACCCCTATTTTGGATCATTTAGCTTTTGAAAACAATGGTGGAAATTGTTTAAATCTCACTTCTAGAATGCCTGATCAGTTATTGACTGATAATGTTTCACCACCTCATCATACTGGTGGTTCCCCTCCAGGTTGTAACACTGATAATGCTTCTGGTCCACCTCCACCCGCTCCCCCGCCCATGACCAGCAATGCTAGCAGTGCTTCAACATTTCATTCATCTCCTCTACCAGGACCTGTCCATACAAGTTCACCCCCATTACCTCCACCCCCACCACCTCCTCCAGGATTTGCTCCCATAGGTTCAGCCCCACCACCTCCACCTCCACCTCCTACATTTCCCACACAAATAGGTTTAACCCCGCCGCCACCACCTCCTCCTCCTCCTCCTCCAGTTCCATCACAGACAGGTTCAGCTCCGCCACCTCCACCACCTCCTCCAGTTCCGCTGCGAACAGGTTCAGCTCCACCACCTCCTCCAGTTCCGATGCGAACAGGTTCAGCCCCGCCACCTCCACCACCTCCTCCTCCAGGTTCTACACGAACAGGATCAGTCCCACCACCTCCACCTCCACCGCCAACAGGCTTTACACAAACAACATCAGCCCCACCACCTCCACCACCACCGCCAGGTTCTGCACGAACTGGTTCAGCCCCACCACCTCCGCCACCACCTCCAGGTTCTGCACAAATTGGTTCAGCCCCGCCACCTCCGCCACCACCTCCAGGTTCTACACGAACAGGTACAGCCCCACCACCTCCGCCACCTCCTCCAGGTTCTACACGAACAGGTTCTGCCCCACCACCTCCGCCACCTCCTCCAGGTTCTACACGAACAGGTTCTGCCCCACCACCTCCGCCACCTCCTCCGGGTTCTACACGAATAGGATTAGGCCCACCACCTCCACCACCTCCTCCAGGTCCTCCACGAACGGGTTCAGCCCCACCACCTCCACCTCCTCCAGGTCCTCCTCGAACAGGTTCAGCCCCACCACCTCCACCTCCTCCAGGATCTGGACGAACAGGTTCAGCTCCGCCAGCACCTCAGCCTCCTAATGCTCCTCCTCCACCACCTGGTCGTGGCTCGTTGCCGGCACCTCCACCTATTTCAGGCAGAGCCCCTAGCGTGCCTCCACCACCAGGCAAAGCTTCTCTAGCAACAACAAATGTGGGAAGAGGTCGTGGTACTGGCACGACTGGTATTGCCGTTAAAAAAACTTTGTTAAAGCCTCTGCATTGGGTGAAAGTTTCTCGAGCAGTGCAAGGGAGTTTATGGGCTGATTCACAGAAACAAGACAATAGTTCAAGGGCCCCTGACATAGACATATCAGAACTTGAGACCCTGTTTTCAGCAGCATCTATTTCTGACGGAAATAGCACTAAAGGTGGAGTTCGGCGTGGTCCTAATATTAATAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAGATCAAAATTCCTTTGCCAGATATGCTTAACGCAGTTTTGGCATTGGATTCTTGTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATACTGAAGAACTATACTGGGAACAAGGATATGCTTGGGAAGTGTGAGCAGTTTTTCATGGAGCTGATGAAGGTTCCACGAATAGAATCCAAGTTAAGGGTGTTTGCTTTTAAAATCACCTTTTCTGGTCAGGTGAGCGATTTAAGGAAAAATTTGAATACAATCAACGATGCAACCAGAGAGGTCAAAGAATCGATAAAATTGCGTCAAATAATGCAAACTATTCTTACATTGGGCAATGCTTTGAATCAGGGAACAGCACGAGGTTCAGCAGTAGGATTCAAATTGGATAGCCTTCTCAAATTATCTGATACCCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAAAAAATGCCAGAATTGATAGATTTTGACAAGGATCTTGTCCATTTGGAAGCTGCTTCCAAGATCCAACTTAAAGCATTAGCTGAAGAAATGCAAGCTGTGCATAAAGGTTTAGAGAAAGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTTCTATATCTTCAGGATTTCGCAAGGTGTTGAAGAATTTTCTTGACTTTGCCGAAGCTGATGTGAGGTCACTTATATCATTGTATGCCGATGTGGGAAGAAATGCTGATTCTTTGTCTAAATACTTTGGGGAGGATCCAGCCAGGTGCCCCTTTGAACAAGTGACACAAATACTTGTTGTCTTTGTAAAGACCTTCAACAAGTCAAGGGAGGAGAATGAAAGGCTAGCAGATGCGGAGAAAAAGAAATTAGAGAAAGAAGCCATGAAGGAAAAGACAGCAGCAAATAACACACATTCTAGAAAAGACGTGGTTCGATAG 3798 0.4581 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPDGMYQLYLHEIVTELHEEFPESSFLAFNFRDGEKRSNFAELMCDYDVIVMDYPKNYEGCPLLPLSLVQHFLRVCESWLLLGNHQNVILFHCERGGWPLLAFLLASLLIFRRVHSGERRTLEMVHREAPKGLLQLLSPLNPQPSQLRYIQYVARRNIAPEWPPPERALSLDCVILRGIPSFDSSNGCRPMFRIFGRNLLSRGGLSTQMIYNMHKKKKHLRHYSQVDCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVENISPQRAPTETAILNGEEKGGLPIEAFSRVQELFSGVEWVDSGDAAAVWLLRQLTVLNEAKEFSRMQGKGSWFSSPADSEEENNGSSVADSSDEAFDVTPKSSAVPSKLLTSDTPILDHLAFENNGGNCLNLTSRMPDQLLTDNVSPPHHTGGSPPGCNTDNASGPPPPAPPPMTSNASSASTFHSSPLPGPVHTSSPPLPPPPPPPPGFAPIGSAPPPPPPPPTFPTQIGLTPPPPPPPPPPPVPSQTGSAPPPPPPPPVPLRTGSAPPPPPVPMRTGSAPPPPPPPPPGSTRTGSVPPPPPPPPTGFTQTTSAPPPPPPPPGSARTGSAPPPPPPPPGSAQIGSAPPPPPPPPGSTRTGTAPPPPPPPPGSTRTGSAPPPPPPPPGSTRTGSAPPPPPPPPGSTRIGLGPPPPPPPPGPPRTGSAPPPPPPPGPPRTGSAPPPPPPPGSGRTGSAPPAPQPPNAPPPPPGRGSLPAPPPISGRAPSVPPPPGKASLATTNVGRGRGTGTTGIAVKKTLLKPLHWVKVSRAVQGSLWADSQKQDNSSRAPDIDISELETLFSAASISDGNSTKGGVRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSCVLDIDQVENLIKFCPTKEEMEILKNYTGNKDMLGKCEQFFMELMKVPRIESKLRVFAFKITFSGQVSDLRKNLNTINDATREVKESIKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELIDFDKDLVHLEAASKIQLKALAEEMQAVHKGLEKVEQELTASENDGSISSGFRKVLKNFLDFAEADVRSLISLYADVGRNADSLSKYFGEDPARCPFEQVTQILVVFVKTFNKSREENERLADAEKKKLEKEAMKEKTAANNTHSRKDVVR 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01240 1265 Coils Coil 1226 1255 - -
Mepo5g01240 1265 PRINTS Proline rich extensin signature 526 542 - -
Mepo5g01240 1265 PRINTS Proline rich extensin signature 502 523 - -
Mepo5g01240 1265 PRINTS Proline rich extensin signature 575 600 - -
Mepo5g01240 1265 PRINTS Proline rich extensin signature 544 561 - -
Mepo5g01240 1265 MobiDBLite consensus disorder prediction 479 500 - -
Mepo5g01240 1265 SMART it6_source 470 1260 IPR015425 -
Mepo5g01240 1265 MobiDBLite consensus disorder prediction 532 834 - -
Mepo5g01240 1265 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Mepo5g01240 1265 SMART PTEN_C2_2 198 338 IPR014020 -
Mepo5g01240 1265 MobiDBLite consensus disorder prediction 479 850 - -
Mepo5g01240 1265 ProSiteProfiles Formin homology-2 (FH2) domain profile. 851 1251 IPR015425 -
Mepo5g01240 1265 PANTHER FORMIN-J 768 1255 - -
Mepo5g01240 1265 Pfam Formin Homology 2 Domain 857 1225 IPR015425 -
Mepo5g01240 1265 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Mepo5g01240 1265 MobiDBLite consensus disorder prediction 408 448 - -
Mepo5g01240 1265 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Mepo5g01240 1265 MobiDBLite consensus disorder prediction 1231 1265 - -
Mepo5g01240 1265 MobiDBLite consensus disorder prediction 516 531 - -
Mepo5g01240 1265 Gene3D - 197 342 - -
Mepo5g01240 1265 MobiDBLite consensus disorder prediction 501 515 - -
Mepo5g01240 1265 Gene3D Formin, FH2 domain 853 1236 IPR042201 -
Mepo5g01240 1265 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Mepo5g01240 1265 FunFam Formin-like protein 851 1237 - -
Mepo5g01240 1265 SUPERFAMILY Formin homology 2 domain (FH2 domain) 926 1253 - -
Mepo5g01240 1265 Coils Coil 1132 1152 - -
Mepo5g01240 1265 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01240 Mepo-Chr5 12603169 12611264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01240 1 441 FH2 protein (formin) Gene Family AT1G31810 76.190 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01240 - - psat:127119864 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01240 5 12603169 12611264 Mepo5g01240 5 12603169 12611264 ECH