Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01232 ATGTACGGCGGCGGGGGAGGAGACGATGCTCTGGCAGCTCGTTTGGGAATAGTACCACCATCACTTCTGATTCCAACATCCTCGTTGATATCACCGGCGGCGGTGAGAGAGGAGAGGGTTCCAGCTCAGCCGCAGTGGAGTCAGCAGGAGACGAGAGAGTTCATAGCGATAAGGGCGGAGCTGGAGAGGGACTTTACTGCTTCGAAGAGGAACAAGACGCTTTGGGAAGTGGTGAGTTCGAAGATGAGGGAGAGAGGGTATAGGAGGAGTCCTGAACAGTGTAAATGTAAGTGGAAGAATCTTGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAACATGGCAAGCAATGCCCATTTTTTGAAGAATTGCATGCAGTTTTTACCGAAAGAGCACATAGCATGCAACGGTTACTTCTTGAATCCGAAACTCGTTCAGCTCAAACAAAGAAAGGAGTGAAGAAAATAAGAAGTGGAGACCGATCCTCTGACGAATTCTCAGAAGATGATGAGGAAGTTGAAGATGACAGTGAAGAGGAGAGACCTGCGAGAAGCAATACACGTAAAAGGAAAGCTGGCAAAATTGCAACAGAGAAGTCTTCAAGGGCAAACAATGCAAACAATAGTACTAGTAATATTCAAGAAGTGCTCAAGGAATTTTTCCAACACCAATTAAAAATGGAAATGCAGTGGAGGGAGGTGATGGAAAGGCGGGCACATGAAAAACAGTTGTTTGAACAGGAATGGCGGCAGTCAATGGAAAAGCTTGAGAGGGAGAGATTAATGATTGAACAGGAATGGAGGGAAAGAGAAGAGCATAGGAGACTGAGGGAGGAGAATAGAGCAGAGAGAAGGGACGCTTTGTTGACGACCCTTTTAAACAAACTCATTCATGAATCTAACTAA 909 0.4554 MYGGGGGDDALAARLGIVPPSLLIPTSSLISPAAVREERVPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGYRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTERAHSMQRLLLESETRSAQTKKGVKKIRSGDRSSDEFSEDDEEVEDDSEEERPARSNTRKRKAGKIATEKSSRANNANNSTSNIQEVLKEFFQHQLKMEMQWREVMERRAHEKQLFEQEWRQSMEKLERERLMIEQEWREREEHRRLREENRAERRDALLTTLLNKLIHESN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01232 302 Gene3D - 46 107 - -
Mepo5g01232 302 SMART sant 42 104 IPR001005 -
Mepo5g01232 302 CDD GT1 44 109 - -
Mepo5g01232 302 PANTHER FI21293P1 41 299 - -
Mepo5g01232 302 FunFam Zinc finger and SCAN domain-containing 20 46 107 - -
Mepo5g01232 302 Pfam Myb/SANT-like DNA-binding domain 44 127 IPR044822 -
Mepo5g01232 302 ProSiteProfiles Myb-like domain profile. 46 102 IPR001005 -
Mepo5g01232 302 MobiDBLite consensus disorder prediction 141 212 - -
Mepo5g01232 302 MobiDBLite consensus disorder prediction 148 165 - -
Mepo5g01232 302 Coils Coil 247 267 - -
Mepo5g01232 302 MobiDBLite consensus disorder prediction 180 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01232 Mepo-Chr5 12505342 12508284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01232 26 302 Trihelix Transcription Factor Family AT2G38250 43.214 9.57e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo5g01232 Myb_DNA-bind_4 1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01232 - - gmx:100812635 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01232 5 12505342 12508284 Mepo5g01232 5 12505342 12508284 ECH