Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01229 ATGGACATTTGTCTTTTAAAAGGCCAATGGCTGTGGCTTCTGTATGTTTTGTTGATACATATTGTAATTAATGACATTGAAGCGATCACTCCTGATGGTGAGGCACTTATCAACTTCAGGACAACAATTGGTAGCTCTGATGGTATCCTGTTACAATGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCAAAAACCAAGAGAGTGACACATCTGATTCTATCACACCATAAGTTAATTGGGTCTTTATCACCTGACCTGGGGAAGTTAGAGCGTCTGAAAGTTCTTGCTCTTCATAACAACAACCTCTATGACAAAATTCCACCAGAATTGGGAAATTGCACTGAATTGCAGTCAATCTTTTTACAGGGTAATTACCTTAGTGGAATGATTCCAAGTGAAATAGGAAATCTCTCGCAGCTTCAAAATTTGGATATATCAAGCAATTCCCTTGGTGGGAATATTCCAGCGTCAATTGGAAAGTTATATAATCTAAAAAACTTCAATGTATCAACCAATTTTCTGGTCGGACCAATACCTTCTGATGGCGTCCTTGCCCACTTTACTGGAAGCTCGTTTGTTGGAAACCGTGGTTTGTGTGGTGTGCAAATCGATTCAACATGTAAAGATGATGGTTCGCCTAGGAATAGTTCTTCTTCAGACCAAAATCCAAACGGAAAAAAGAATTCTGGCCGACTTCTCATCAGTGCATCAGCAACTGTGGGCGCACTACTTTTGGTGGCACTTATGTGTTTCTGGGGCTGTTTTCTTTATAAAAAGTTTGGTAAAAATGATAGAATAAGTCTTGCAGTGGATGTTGGTCCAGGTGCCTCGATAGTGATGTTTCATGGAGACCTACCGTATTCTTCGAAAGACATTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGAGTAGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCGTTGAAAAGGATCGTAAAGTTGAATGAGGGATTTGATCGTTTTTTTGAGAGGGAGCTTGCAATTCTAGGAAGCATCAAACACCGCTATTTAGTTAACTTACGTGGATATTGTAATTCACCTACATCAAAGTTGTTAATATATGACTATCTACCTGGGGGTAGTCTTGATGAAGTTCTTCATGAAAGATCTGAGCAACTAGACTGGGATTCACGGTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCTTACTTGCACCACGATTGTTCCCCTAGGATCATACACCGAGACATTAAATCAAGCAACATTTTGCTTGATGGAAAATTGGATGCTAGAGTTTCTGATTTTGGACTTGCTAAACTTCTGGAGGATGAAGAATCTCACATCACCACTATTGTTGCCGGAACATTTGGTTATCTAGCTCCAGAGTATATGCAAAGTGGAAGAGCAACTGAGAAGACCGATGTTTATAGTTTTGGGGTGTTGACACTTGAAGTGCTTAGTGGAAAGCGGCCAACAGATGCATCCTTCATTGAAAAGGGTCTAAATGTTGTTGGTTGGTTGAATTTCCTTATTACTGAAAATAGGCCAAGGGAAATTGTCGATCCACTATGCGACGGGGTGCAGGTGGAGAGCCTTGATGCCTTGCTCACTATGGCTATTCAGTGTGTTTCCTCAAATCCAGAGGATCGACCCACTATGCACCGAGTGGTCCAGTTGCTTGAATCGGAGGTAGTAACTCCATGCCCAAGTGACTTCTATGATTCAAACTCTGACTAG 1776 0.4105 MDICLLKGQWLWLLYVLLIHIVINDIEAITPDGEALINFRTTIGSSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLILSHHKLIGSLSPDLGKLERLKVLALHNNNLYDKIPPELGNCTELQSIFLQGNYLSGMIPSEIGNLSQLQNLDISSNSLGGNIPASIGKLYNLKNFNVSTNFLVGPIPSDGVLAHFTGSSFVGNRGLCGVQIDSTCKDDGSPRNSSSSDQNPNGKKNSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAVDVGPGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELAILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNVVGWLNFLITENRPREIVDPLCDGVQVESLDALLTMAIQCVSSNPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01229 591 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Mepo5g01229 591 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 191 - -
Mepo5g01229 591 SMART serkin_6 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01229 591 Pfam Protein kinase domain 308 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01229 591 Gene3D Transferase(Phosphotransferase) domain 1 382 579 - -
Mepo5g01229 591 SUPERFAMILY Protein kinase-like (PK-like) 289 573 IPR011009 -
Mepo5g01229 591 ProSitePatterns Protein kinases ATP-binding region signature. 312 338 IPR017441 GO:0005524
Mepo5g01229 591 ProSiteProfiles Protein kinase domain profile. 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01229 591 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 74 574 - -
Mepo5g01229 591 Gene3D Phosphorylase Kinase; domain 1 283 381 - -
Mepo5g01229 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Mepo5g01229 591 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 382 584 - -
Mepo5g01229 591 SUPERFAMILY L domain-like 31 194 - -
Mepo5g01229 591 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Mepo5g01229 591 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 280 381 - -
Mepo5g01229 591 MobiDBLite consensus disorder prediction 215 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01229 Mepo-Chr5 12478874 12490750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01229 1 582 Receptor kinase-like Gene Family AT2G35620 74.742 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Mepo5g01229 Pkinase 6.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01229 - - gmx:100819230 1071.23