Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01218 ATGAAGGAACCATCAAATTCAAAACCATGGAGACCATTCACATCAAATTGTTGCACAACTGAAAACCAAACAATATTAAGAAACTTTAGCAAATGCAAGCCTTCACGTTCAGATTATTCTAAGAACATTGCTCCTTTACCATCTTTTAGGAGACTATCTTTTTCTGATCTTAGCCGTTCGTCTTCAACGCGAATCAATGAAGATCTTGCACTGTCTTTTGGTTCTGATTTGTTTGATTTTCAGCTGACTGAACTTCGTGCTATCACTCAGAATTTTTCTAGTAATTTCTTGCTTGGTGAAGGTGGTTTTGGAACTGTTCATAAGGGTTATTTTGATGATAATTTTAGACAAGGTTTGAAGGCTCAACCTGTAGCAGTTAAGCTTTTGGATATTGAAGGTTTACAAGGACATCGTGAATGGCTTGCAGAAGTGATTTTTCTTGGGCAGCTAAGACATCCAAATTTGGTGAAATTGATTGGATATTGTTGTGAAGATGAAGAAAGACTACTTGTCTATGAATTCATGCCAAGGGGAAGCTTGGAGAATCACTTGTTTAGAAGACTAACATCATTACCATGGGCAACAAGAATAAAAATTGCAATAGGTGCTGCTAAAGGCCTTTCTTTCTTGCATGGAGCTGAAAAACCAGTCATTTACAGAGACTTCAAGACTTCTAATGTCTTACTTGATTCAGACTTCACAGCAAAATTATCAGATTTTGGACTTGCAAAAATGGGGCCAGAGGGATCAAAGTCACATGTTACAACCAGAGTTATGGGCACATATGGATATGCAGCCCCCGAATACATCTCAACAGGACACTTAACTACAAAAAGTGATGTCTATAGCTTCGGCGTAGTCCTGCTAGAACTGCTAACAGGAAGAAGAGCAACAGACAAAACAAGACCAAAGACAGAACAAAACATTGTGGATTGGACAAAGCCTTACTTAAGTAGCAGTAGAAGATTGAGGTACATTATGGATCCAAGGCTTGCAGGACAATATTCTGTCAAAGGTGCAAAAGAGATTGCACATTTGGCATTGCATTGCATAAGTTTGCATCCTAAAGACAGACCAAGAATGGCTATGATTGTTGAAACACTTGAAAGCCTAGAACAGTTCAAAGATATGGCTGTTACTAGTGGACACTGGCCAATATCATCAAAATCTACTAAAAATGTTTCATCTAATATTAAGGTGAAAGCTAGAGCAGTTAGTGTAAACCAGAAGCAACATGCTCCGGTTAAGAGCATAAAGACTTGA 1263 0.3816 MKEPSNSKPWRPFTSNCCTTENQTILRNFSKCKPSRSDYSKNIAPLPSFRRLSFSDLSRSSSTRINEDLALSFGSDLFDFQLTELRAITQNFSSNFLLGEGGFGTVHKGYFDDNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWATRIKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKTRPKTEQNIVDWTKPYLSSSRRLRYIMDPRLAGQYSVKGAKEIAHLALHCISLHPKDRPRMAMIVETLESLEQFKDMAVTSGHWPISSKSTKNVSSNIKVKARAVSVNQKQHAPVKSIKT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01218 420 Pfam Protein tyrosine and serine/threonine kinase 98 368 IPR001245 GO:0004672|GO:0006468
Mepo5g01218 420 PANTHER OS01G0588500 PROTEIN-RELATED 63 372 - -
Mepo5g01218 420 FunFam Serine/threonine-protein kinase BIK1 59 174 - -
Mepo5g01218 420 ProSiteProfiles Protein kinase domain profile. 92 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01218 420 CDD STKc_IRAK 98 371 - -
Mepo5g01218 420 SUPERFAMILY Protein kinase-like (PK-like) 72 369 IPR011009 -
Mepo5g01218 420 ProSitePatterns Protein kinases ATP-binding region signature. 98 127 IPR017441 GO:0005524
Mepo5g01218 420 FunFam Serine/threonine-protein kinase PBS1 175 383 - -
Mepo5g01218 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mepo5g01218 420 Gene3D Transferase(Phosphotransferase) domain 1 175 386 - -
Mepo5g01218 420 Gene3D Phosphorylase Kinase; domain 1 54 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01218 Mepo-Chr5 12365014 12368238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01218 80 417 Glycoside Hydrolase AT3G07070 47.965 7.20e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo5g01218 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01218 - - gmx:100814241 724.931