Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01209 ATGAAGAACACAACCGAAGATGCTACTTCCACACAAGATCTCGACCCACAAAGCGACCACAGTTCCGATTATTTACCCCAACCACAACCCCGCCGTCTACGCGGCTTCGCCGCCACGGCGGCGGGGACAAATTCGACCGGAAAAGGAAAAAAAGAGCGAGAGAAAGAGAAGGAACGAACGAAGCTCCGGGAACGACACCGTCGAGCTATCACGAGTAGAATGTTAGCTGGACTCCGTCAGTATGGTAATTTCCCTCTCCCAGCGCGTGCTGATATGAATGATGTACTTGCTGCTCTCGCGCGTGAGGCTGGTTGGATTGTTGATGCTGATGGAACTACTTATCGCCAGTGTCTCCCTCCTTCCAACATGGGATCATTTGCTGCAAGGTCAGTTGAAAGTCAACCATCTGGTGGTACTTTGAGAACTTGTTCGGTTAAGGAAACACTAGAGAATCACTCACCGGGACTTAGAATTGATGAATGTGTGTCACCTTCATCTATTGATTCTGTTTTAATTGCAGAAAGGGACTCTAAGAATGGAAACTATGCAAGTGTAAGCCCAATCAATTCTACTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGTGCATGAAAATGACTTCAATTGCACACCATATGTTCCTGTTTACATAAAACTCCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATGGATCCTGAAGGCATTAGGCAGGAGCTAATCCATATTAAGTCCTTAAATATTGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAACTCCCAGAAATATGAGTGGTCTGGGTATAGGGAGCTTTTTAGTATAATTAGAGAATTCAAGCTGAATATACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGATTCTAGTGATGCATTGATTTCCCTCCCACAATGGGTTTTGGATATTGGAAAAGACAACCAGGACATATTTTTCACAGATCGTGAAGGACGACGAAATACTGAATGCCTATCTTGGGGAATTGACAAAGAGCGAGTTCTCAAAGGAAGAACTGGAATTGAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGTATGATTGATGCTGTAGAAATTGGACTGGGAGCATCTGGGGAGCTGAAATACCCTTCCTTTTCAGAAAGGATGGGGTGGAGGTATCCTGGTATTGGTGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTGCGCAGAGCTGCCAAACTACGCGGTCACTCTTTTTGGGCTAGGGGACCTGATAATGCTGGGCACTACAATTCTATGCCACATGAGACTGGATTCTTTTGTGAGCGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTACATTGGTACTCCCAGACTTTAGTAGACCATGCAGATAATGTTTTGTCTCTTGCAAACCTTGCTTTTGAGGGAACAAAAATTATTGTCAAGGTTCCTGCCGTATACTGGTGGTACAAGACTCCTAGTCATGCAGCAGAATTGACTGCAGGATATCACAATCCCACAAATCAGGATGGATACTCTCCTGTGTTTGAGGTTCTGAAAAAACACGCTGTCACCATGAAATTTGTCTGCTTAGGATTTAATCCTTCCAACCAGGAAGCCAATGAGTCATTGGTTGATCCAGATGGCCTGAGTTGGCAGGTATTAAACTCAGCTTGGGAACGAGGGTTGATCACTTCTGGAGAGAATGCAATCTTTTGTTATGATAGAGAAAGGTATGAGAGATTGATTGAGATGGCAAAGCCCAGAAATGATCCTGATCACCGGCATTTTTCATTCTTTGTTTATCAGCAACCATCTTTGCTTCAGGGAAATGTTTGCCTGTCAGAATTGGATTTCTTCATCAAATGCATGCATGGTGAGATGACAGGGAATCTTTAA 1953 0.4368 MKNTTEDATSTQDLDPQSDHSSDYLPQPQPRRLRGFAATAAGTNSTGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWIVDADGTTYRQCLPPSNMGSFAARSVESQPSGGTLRTCSVKETLENHSPGLRIDECVSPSSIDSVLIAERDSKNGNYASVSPINSTDCLEADQLMQDIHSGVHENDFNCTPYVPVYIKLPAGIINKFCQLMDPEGIRQELIHIKSLNIDGVVVDCWWGIVEGWNSQKYEWSGYRELFSIIREFKLNIQVVMAFHECGGNDSSDALISLPQWVLDIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGMIDAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRRAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLVDHADNVLSLANLAFEGTKIIVKVPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEVLKKHAVTMKFVCLGFNPSNQEANESLVDPDGLSWQVLNSAWERGLITSGENAIFCYDRERYERLIEMAKPRNDPDHRHFSFFVYQQPSLLQGNVCLSELDFFIKCMHGEMTGNL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01209 650 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 295 316 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 252 266 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 512 523 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 273 291 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 530 553 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 568 590 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 461 480 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 388 410 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 495 511 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 Pfam BES1/BZR1 plant transcription factor, N-terminal 47 191 IPR008540 -
Mepo5g01209 650 Pfam Glycosyl hydrolase family 14 234 617 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 MobiDBLite consensus disorder prediction 1 64 - -
Mepo5g01209 650 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 159 645 IPR001554 GO:0000272|GO:0016161
Mepo5g01209 650 SUPERFAMILY (Trans)glycosidases 212 646 IPR017853 -
Mepo5g01209 650 MobiDBLite consensus disorder prediction 1 25 - -
Mepo5g01209 650 Gene3D Glycosidases 208 649 - -
Mepo5g01209 650 MobiDBLite consensus disorder prediction 47 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01209 Mepo-Chr5 12291560 12297998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01209 60 646 Glycoside Hydrolase AT5G45300 69.610 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Mepo5g01209 Glyco_hydro_14 5.8e-86 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01209 K01177 - gmx:100777004 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01209 5 12291560 12297998 Mepo5g01209 5 12291560 12297998 ECH