Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01196 ATGGGTGTAAACAATTTGTCTGGTATGATTCCTTCTTGTCTTTACAATATCTCAGCACTTACTGAACTCTCACTAACCATGAATAGATTTAATGGCTCACTTCCACCCAACATGTTTTACACCCTCCCTAATCTCAAATCTTTTGAACCTGGAGGAAATAAATTCTCAGGTCCAATCCCTGTTTCCATTGCAAATGCTTCTTCCCTGCAAATAATTGATTTAGGCCAAAACAATTTGGTTGGACAAGTTCCAAGTCTAGAGAAGTTACAAGACCTTTACTGGCTGAGTTTGGAATACAACTATTTTGGTAACAATTCAACTATAGATTTAGAGTTTTTAAAATATTTGACAAACTGTAGTAAACTAGAAAAGCTTTCAATATCTAATAATAAGTTTGGAGGTAGTTTTCCAAATTCCATTGGCAATTTATCCACCCAACTTAGACAACTATATCTTGGAGGTAATATGATAACAGGAAAAATTCCCATGGAAATAGGAAATTTGGTTGGCTTAGCTCTCTTGTCCATGGAACTTAACCAATTTGATGGAATTGTTCCATCTACTTTAGGGAAGTTCCAAAATATGCAAATTTTGGATCTAAGCGAAAACAAGTTGTCAGGATATATACCACCCTTTATAGGCAATCTCAGTCAATTGTTTAAGTTGGCTTTGCACAGTAATATGTTTCAAGGAAATATTCCTCCAAGCATAGGAAATTGTCAAAAGTTACAATACCTAGATCTTTCTCATAATAAACTTAGTGGAACCATACCTTTAGAGATTTTTAATCTTTTTTATTTATCAAATTTATTGAACTTGTCACATAACTCTTTGAGTGGTAGCTTACCAAGAGAAGTGGGTATGCTAAAAAATATTAATATGCTAGATGTATCTGAGAATCAATTGTCTTCTGATCTTCCTAGAACAGTTGGTGAATGTACAAGTTTAGAATACCTTCTTTTGCAAGGTAACTCCTTCAGCGGAACAATACCTTCCTCTTTGGCTTCTCTCAAAGGTCTTCGATATTTAGACCTTTCAATAAATCAATTGTCTGGATCAATTCCTGATGTTATGCAGGATATCTCATGTTTAGAACACTTGAATGTTTCTTTTAACATGCTGGAAGGTGAGGTCCCAACAAATGGTGTCTTTAGAAATGCATCCCAAGTAGCAATGATTGGAAACAATAAGCTTTGTGGAGGTATTTCTCAGCTGCATTTAGCACCATGCCCTATCAAGTGTAGGAAACACCCAAAACACCATAAATCCAGGCTGATAGCAGTGATAGTTAGCATGGTTTCTTTTCTTCTCATATTTTTATTTATTTTAACTATCTACTGGATGAGGAAAATTAATCAAAAAAGATCTTTCGATTCACCATCAAATGATCAAGAAGCTAAGGTTTCGTTCCGAGACTTATACCAAGGAACCGATGGGTTCTCAGATAGAAACTTGATCGGATCAGGAAGTTTTGGTGATGTGTACAAAGGAAATCTTGTGTCAGAAGACAATGTTGTTGCTATAAAGGTTTTCAACCTCCAAAACAATGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTAAAATTTATTAGACACCGAAATTTAGTTAAGATTTTAACATGTTGTTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCCCTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCCAAGGTTTTAAATGAAGAGCATACAGCAACATTGGACCTCAGTCATAGATTAAACATCATTATGGATGTTGGTTCTGCATTACATTATCTTCATCATGAATGTGAGCAATTGGTCCTTCATTGTGATATAAAGCCAAGCAATGTCCTACTTGATGATGATATGGTTGCACATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCGGCCATTGGTGGTTCCTCTCATAAGAATACTAAGACAATTGGAATTAAAGGAACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACCGGTAGAAGACCCACTGATGAGGCGTTTGAAGATGGTCAAAATCTACATAACTTTGCTGCAACATCATTTCCTGGTAATCTTATAAAGATCTTGGACCCACATCTTGTATCAAGATATGCAGAAGTAGAAATACAAGATGGAAAGAGTGAGAATCTTATTCCAAGTGTAAAGGAGTGCTTAGTTTCACTTTTTAAGATTGGACTTATTTGTTCAATGGAATCGCCGAATGAAAGAATGAATATTGTGGATGTTATTAGAGAACTTAACACAATCCATAAGGCCTTTCTCACTGGTGAGATAAACTGA 2379 0.3565 MGVNNLSGMIPSCLYNISALTELSLTMNRFNGSLPPNMFYTLPNLKSFEPGGNKFSGPIPVSIANASSLQIIDLGQNNLVGQVPSLEKLQDLYWLSLEYNYFGNNSTIDLEFLKYLTNCSKLEKLSISNNKFGGSFPNSIGNLSTQLRQLYLGGNMITGKIPMEIGNLVGLALLSMELNQFDGIVPSTLGKFQNMQILDLSENKLSGYIPPFIGNLSQLFKLALHSNMFQGNIPPSIGNCQKLQYLDLSHNKLSGTIPLEIFNLFYLSNLLNLSHNSLSGSLPREVGMLKNINMLDVSENQLSSDLPRTVGECTSLEYLLLQGNSFSGTIPSSLASLKGLRYLDLSINQLSGSIPDVMQDISCLEHLNVSFNMLEGEVPTNGVFRNASQVAMIGNNKLCGGISQLHLAPCPIKCRKHPKHHKSRLIAVIVSMVSFLLIFLFILTIYWMRKINQKRSFDSPSNDQEAKVSFRDLYQGTDGFSDRNLIGSGSFGDVYKGNLVSEDNVVAIKVFNLQNNGAHKSFIVECNALKFIRHRNLVKILTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPKVLNEEHTATLDLSHRLNIIMDVGSALHYLHHECEQLVLHCDIKPSNVLLDDDMVAHVSDFGIARLVSAIGGSSHKNTKTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDEAFEDGQNLHNFAATSFPGNLIKILDPHLVSRYAEVEIQDGKSENLIPSVKECLVSLFKIGLICSMESPNERMNIVDVIRELNTIHKAFLTGEIN 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01196 792 SUPERFAMILY Protein kinase-like (PK-like) 462 779 IPR011009 -
Mepo5g01196 792 FunFam LRR receptor-like serine/threonine-protein kinase EFR 108 416 - -
Mepo5g01196 792 Pfam Leucine rich repeat 315 374 IPR001611 GO:0005515
Mepo5g01196 792 Pfam Leucine Rich Repeat 121 143 IPR001611 GO:0005515
Mepo5g01196 792 Pfam Leucine Rich Repeat 242 261 IPR001611 GO:0005515
Mepo5g01196 792 Gene3D Phosphorylase Kinase; domain 1 444 561 - -
Mepo5g01196 792 ProSiteProfiles Leucine-rich repeat profile. 242 263 IPR001611 GO:0005515
Mepo5g01196 792 SUPERFAMILY L domain-like 145 400 - -
Mepo5g01196 792 ProSiteProfiles Protein kinase domain profile. 480 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01196 792 Gene3D Ribonuclease Inhibitor 118 410 IPR032675 -
Mepo5g01196 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Mepo5g01196 792 Gene3D Ribonuclease Inhibitor 1 117 IPR032675 -
Mepo5g01196 792 SMART LRR_typ_2 361 386 IPR003591 -
Mepo5g01196 792 SMART LRR_typ_2 17 41 IPR003591 -
Mepo5g01196 792 SMART LRR_typ_2 289 313 IPR003591 -
Mepo5g01196 792 SMART LRR_typ_2 192 216 IPR003591 -
Mepo5g01196 792 SMART LRR_typ_2 240 264 IPR003591 -
Mepo5g01196 792 SMART LRR_typ_2 337 360 IPR003591 -
Mepo5g01196 792 SMART serkin_6 480 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01196 792 SUPERFAMILY L domain-like 4 210 - -
Mepo5g01196 792 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 562 791 - -
Mepo5g01196 792 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 114 780 - -
Mepo5g01196 792 Pfam Protein kinase domain 482 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01196 792 FunFam LRR receptor-like serine/threonine-protein kinase EFR 451 561 - -
Mepo5g01196 792 ProSitePatterns Protein kinases ATP-binding region signature. 486 509 IPR017441 GO:0005524
Mepo5g01196 792 PRINTS Leucine-rich repeat signature 337 350 - -
Mepo5g01196 792 PRINTS Leucine-rich repeat signature 243 256 - -
Mepo5g01196 792 Gene3D Transferase(Phosphotransferase) domain 1 562 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01196 Mepo-Chr5 12134119 12136830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01196 3 786 Receptor kinase-like Gene Family AT3G47570 46.289 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo5g01196 Pkinase 2.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01196 - - mtr:25486456 1063.91