LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g01195	ATGTGCTTCCTAAAACAGTTGAAGGTTATAGCAGTGCATGTCAACAAGTTGTCTGGTACATTTCCTTCTTGTCTTTATAATATGCTATCTCTTAATGTGATCTCAGCGGCAAAAAATAACTTTAGCGGCTCTCTTCCACCCAATATGTTCCACACCCTCCCCAATCTCTATTTCTTTGGGATTTTCGGGAATCAAATCTCAGGTACAATTCCTATTTCCATTACAAATGCTTCTAGTTTGACGACTTTTGATATTAGTCAAAACCATTTTGTCGGACAAGTTCCAACTCTAGGGAAACTAAAGAGTCTTTCGTATCTAACTATGTCTTCCAACAATATTGGTGACAATTCCACGAAAGATTTGGAGTTTTTAAAATCATTGGCAAATTGTAGTAAGTTGCAAACTCTCTCGTTGGCCAGTAATAATTTTGGAGGTAGTTTGCCAAATTTTATAGGTAATTTATCCACAACACTCAGTTATTTATATATTGGGGGTAATCAAATACATGGAAAAATTCCCACAGAATTAGGAAATCTAATTAGCTTGATTCTCTTGACCATGGACGATAACCATTTGGAAGGAACCATTCCGACTAATTTTAAGAAGTTTCAGAATATACAAAGGTTAGAATTGCAAGGAAACAGGCTGTCAGGGGATATACCAACCTTCATAGGCAACCTCAGCCAGTTGTATTATTTGAGACTAGATAACAATATACTAGAAGGGAATATTCCTCCAAATATAGGGAATTGTCAAAAGTTACAACACCTAAACCTTTCACAAAACAACCTCAGAGGATCCATACCCTTAGAGATTTTCGGTATTTCCTCTTTGACAAATTTACTTGACTTGTCACAAAACATATTGAGTGGAAGCTTACCAAAAGAAGTTGGTAAGCTAAAAAGTATTAGTTGGCTAGATGTCTCTGAGAATCATTTGTCTGGAGACATTCCTGGAACCATTGGTGAATGCATAAGCTTAGAATACCTTCATTTGCAAGGGAACTCCTTCAAAGGAACAATACCATCCTCTTTGGCTTCTCTTAAAGGTCTGCGATATTTAGATCTTTCAAGAAATCAATTGTATGGATCAATTCCTGATGTTTTGCAAAATATCTTAAGCTTAGAACACTTGAATGTTTCTTTTAATAAGTTGGAAGGTGAGGTACCGACAAACGGTGTCTTTGAAAATACAACCCAAGTAGCAATGATCGGAAACAATAAGCTTTGTGGAGGAATTTCACAGTTGCATTTACCACCATGCCCAATCAAGGGTTGGAAACAGGCAAAAAACCATAATCTCAAGTTGATAGCGGTGATAGTTAGTGTAGTTTCTTTTCTTCTGATACTTTCATTTAGTCTAGTTATCTACTGGATGAGGAAAAGAAACCAAAAACCTTCTATTGATTTACCAACAATTGATCAACTAGATAAGGTTTCATACCAAGACTTACACCAAGGAACCAATGGGTTCTCAGATAGAAACTTGATTGGATCAGGAAGTTTTGGTTCTGTGTACAGAGGAAATCTTCTGTCAGAAGATAATGTTGTTGCCATAAAGGTTCTGAACCTCCAAAAAAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTAAAAAATATTAGACACCGAAATTTAGTTAAGATTTTAACATGTTGTTCTAGTACGGATTACAAAGGTCAAGAATTTAAAGCTCTGGTATTTTACTACATGGAAAATGGAAGCTTAGAACAGTGGTTGCATCCGGGAATTTTAAATGAAAATCATCCAACAAAATTGAACCTTGTTCTTATATTAAACATAATTGTAGATGTTGCTTCTGCATTACATTATCTTCATCAAGAATGTGACCAATTGATAGTTCATTGTGATCTAAAGCCAAGTAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATTGCGAGACTTGTCTCAACCATTGGTTGTGATACTAGTACAATTGGAATAAAAGGAACTATTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACGTGCGGTGACATGTATAGCTTTGGAATCCTTATGCTGGAAATGCTTACCGGTAGAAGACCCACTGATGAAGTTTTTCGAGATGGTCAAAATCTTCATAACTTTGTTGCAATTTCATTTCCTTGTAATCTTATACAGATTTTGGACCCACATCTTGTATCAAGAGATGTAGAAGTAGCAATAAAAGATGGAAACTGTGATAATCTTATTCTAAGTGAAGAGGAGTGCTTAGTTTCACTTTTTAGGATTGGACTGATGTGTTCAATGGAATCACCAAAAGAAAGAATGAATATTGTGGATGTCACTAGAGAGCTTAATGTAATCAGAAAGACATTTCTCTTTGGTGAGATAAACTGA	2400	0.36	MCFLKQLKVIAVHVNKLSGTFPSCLYNMLSLNVISAAKNNFSGSLPPNMFHTLPNLYFFGIFGNQISGTIPISITNASSLTTFDISQNHFVGQVPTLGKLKSLSYLTMSSNNIGDNSTKDLEFLKSLANCSKLQTLSLASNNFGGSLPNFIGNLSTTLSYLYIGGNQIHGKIPTELGNLISLILLTMDDNHLEGTIPTNFKKFQNIQRLELQGNRLSGDIPTFIGNLSQLYYLRLDNNILEGNIPPNIGNCQKLQHLNLSQNNLRGSIPLEIFGISSLTNLLDLSQNILSGSLPKEVGKLKSISWLDVSENHLSGDIPGTIGECISLEYLHLQGNSFKGTIPSSLASLKGLRYLDLSRNQLYGSIPDVLQNILSLEHLNVSFNKLEGEVPTNGVFENTTQVAMIGNNKLCGGISQLHLPPCPIKGWKQAKNHNLKLIAVIVSVVSFLLILSFSLVIYWMRKRNQKPSIDLPTIDQLDKVSYQDLHQGTNGFSDRNLIGSGSFGSVYRGNLLSEDNVVAIKVLNLQKKGAHKSFIVECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVFYYMENGSLEQWLHPGILNENHPTKLNLVLILNIIVDVASALHYLHQECDQLIVHCDLKPSNVLLDDDMVAHVSDFGIARLVSTIGCDTSTIGIKGTIGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDEVFRDGQNLHNFVAISFPCNLIQILDPHLVSRDVEVAIKDGNCDNLILSEEECLVSLFRIGLMCSMESPKERMNIVDVTRELNVIRKTFLFGEIN	799

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g01195	799	Gene3D	Ribonuclease Inhibitor	126	422	IPR032675	-
	Mepo5g01195	799	SUPERFAMILY	L domain-like	157	411	-	-
	Mepo5g01195	799	Gene3D	Ribonuclease Inhibitor	1	125	IPR032675	-
	Mepo5g01195	799	ProSiteProfiles	Protein kinase domain profile.	491	794	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g01195	799	Pfam	Leucine rich repeat	326	385	IPR001611	GO:0005515
	Mepo5g01195	799	SUPERFAMILY	Protein kinase-like (PK-like)	465	786	IPR011009	-
	Mepo5g01195	799	SMART	serkin_6	491	794	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g01195	799	Pfam	Leucine Rich repeat	250	266	IPR001611	GO:0005515
	Mepo5g01195	799	PANTHER	OS04G0122200 PROTEIN	4	791	-	-
	Mepo5g01195	799	ProSitePatterns	Protein kinases ATP-binding region signature.	497	520	IPR017441	GO:0005524
	Mepo5g01195	799	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	622	634	IPR008271	GO:0004672\|GO:0006468
	Mepo5g01195	799	Gene3D	Phosphorylase Kinase; domain 1	472	572	-	-
	Mepo5g01195	799	SUPERFAMILY	L domain-like	2	221	-	-
	Mepo5g01195	799	Gene3D	Transferase(Phosphotransferase) domain 1	573	794	-	-
	Mepo5g01195	799	FunFam	LRR receptor-like serine/threonine-protein kinase EFR	462	572	-	-
	Mepo5g01195	799	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	573	797	-	-
	Mepo5g01195	799	Pfam	Protein kinase domain	493	714	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g01195	799	FunFam	LRR receptor-like serine/threonine-protein kinase EFR	119	427	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g01195	Mepo-Chr5	12126657	12129170	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g01195	4	794	Receptor kinase-like Gene Family	AT3G47570	45.658	0.0	696

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Mepo5g01195		Pkinase	9.3e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g01195	-		-	gmx:100778093	1074.31