Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01190 ATGGCAGTGGCTACACTAACAAACCAAACTGATCATTTGGCATTGCTCAAATTCAAAGAATCAATATCTAGTGATCCATATAATGCTCTTGAATCTTGGAATTCTTCCATCCACTTCTGCAAGTGGCATGGAATCACATGCAACCCCTTGCATCAAAGAGTTACACAGTTGAACCTACTAGGATATCTGTTACATGGATCTTTATCTCCTCATGTTGGTAATCTCACTTATCTGAAACAGCTCAACCTTGTAGACAACAACTTCCATGGAGAAATTCCACAAGAGTTGGGCCAGTTACTACAATTGCAACACCTTTATCTCAGCAATAACTCTTTTGTAGGAGAAATTCCTTCAAACCTGTCATACTGCACCAGTCTCACACGCTTATATTTGAATGGGAACAAACTCATTGGTAAAATACCAATTGAAATCGACTCATTGAAAAAGCTTCAAGAAATGACTGTTTCGTTCAACAATTTAATTGGAAAAATCCCTTTATTCATAGGAAATCATTCATGCTTAACTGAATTTTTGGTTACTGGTAACAATTTAGAGGGAGATATTCCACAAGAAATATGTCGCCTCAACAACTTGACAATTTTATTTGTGGGTGAGAACAAATTGTCTGGTATGATTCCTTCTTGTCTTTACAATATCTCATCACTTATTATGCTCTCAGCAACAGACAATAACTTTCATAGCTCTCTTCCCCCCAACATGTTCCACACCCTCCACAATCTCCAATATTTTGAAATTGGCATGAATGAAATCTCTGGTCCAATTCCTACTTCCATTATAAATGCATCTTCTGCCTTTACATTAATTGATTTCAGCAAAAATTATTTTGTCGGAAAAGTTCCAACTCTAGGAAGGCTAAAAGATCTATTGTATCTAAATTTGGAATTCAACAATTTAGGTGACAATTCAACTAAGGATTTAGAATTTTTAAAATCTTTGACAAATTGTAGTAAACTACAAATGGTTTCTATACTTGGTAATAATTTTGGAGGTAATTTGCCAAATTCTGTTGGCAATTTATCCACTGAACTTACTGAACTATATGTTGGGGCTAATCAGATATCTGGAAAAGTTCCTGCAGAATTAGGGAATTTAATTGGCTTAACTCTACTGAACTTGGCAAAAAACCATTTTGAAGGAACTATTCCAAATACTTTTTCGAAGTTCCAAAATATGCAAGTGATATATTTGAGAAAAAACAAGTTGTCAGGAGATATACCACCCTCTCTAAGCAATCTTAGTAAATTGTATAAGTTGGATTTATCTGTCAATATGTTCAAAGGAAATATTCCTCCAAGCATAGGAAACTTACACAAATTACAATATCTAGATCTTTCTCAGAATAAGCTTAGTGGAACCATACCTGTAGAGAAAACATGCAAAACAGCACAAGTTCAAGTTGATAGCAGTGATAGTGTGGTTTCTTTTCTTCTCATACTTTCATTTATCATAACTATCTACTGGATGAGGAAAAGAAATCCAAAGCAATCTTTTGATTCACCAACAGTTGATCAACTATCTAAGGTTTCATACCAAGAATTACATCAAGGAACCGATGGGTTCTCAACTAGAAACTTGATAGGATCAGGAAATTTTGGGCATGTGTACAAAGGAAATCTTGTGTCAGAGGATAATAGTGTTGCCGTAAAGGTCTTGAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCATTGTTGAATGCAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGGTTTTAACCTGTTGTTCAAGTACAGATTACAAAGGTCAAGAATTTAAAGCTCTGGTTTTTGAGTACATGAAGAATGGAAGCTTAGAACAATGGTTGCATCCTGAGATTTTAAATGCAGAACCCCCAACAACATTGGACTTTGCTCATAGATTATACATCATTATCGATGTTGCTTCTGCATTACATTATCTTCATAAAGAATGTGAGGAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATATCCTTCTTGACGATGTCATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTCATCTTAGCTATTGGCAGTACCTCTCATAAGAATACAAGTACAATTGGAGTTAGAGGAACAGTTGGCTATTCTCCTCCTGAGTATGGAATGGGTGCTGAAGTATCCACATGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACCGGTAGAAGACCCACTGATCACACTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTGCAATATCATTTCCTGGTAATCTTAAGAAGATTTTGGACCCACATCTTTTATCAATGTACGCAGAAGTAGAAATGAAAGATGGAAATCATGAGAATCGTATTCCAGCTGCCAAAGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTATGTGTTCAATGGAGTCACCAAAAGAAAGAATTAATATTGGGGATGTCACTGGAGAGCTTAGTATAATCAGAAAGGCCTTTCTTGCCGGTGCTCAAACTCGTAATTAG 2526 0.3587 MAVATLTNQTDHLALLKFKESISSDPYNALESWNSSIHFCKWHGITCNPLHQRVTQLNLLGYLLHGSLSPHVGNLTYLKQLNLVDNNFHGEIPQELGQLLQLQHLYLSNNSFVGEIPSNLSYCTSLTRLYLNGNKLIGKIPIEIDSLKKLQEMTVSFNNLIGKIPLFIGNHSCLTEFLVTGNNLEGDIPQEICRLNNLTILFVGENKLSGMIPSCLYNISSLIMLSATDNNFHSSLPPNMFHTLHNLQYFEIGMNEISGPIPTSIINASSAFTLIDFSKNYFVGKVPTLGRLKDLLYLNLEFNNLGDNSTKDLEFLKSLTNCSKLQMVSILGNNFGGNLPNSVGNLSTELTELYVGANQISGKVPAELGNLIGLTLLNLAKNHFEGTIPNTFSKFQNMQVIYLRKNKLSGDIPPSLSNLSKLYKLDLSVNMFKGNIPPSIGNLHKLQYLDLSQNKLSGTIPVEKTCKTAQVQVDSSDSVVSFLLILSFIITIYWMRKRNPKQSFDSPTVDQLSKVSYQELHQGTDGFSTRNLIGSGNFGHVYKGNLVSEDNSVAVKVLNLQKKGAHKSFIVECNALKNIRHRNLVKVLTCCSSTDYKGQEFKALVFEYMKNGSLEQWLHPEILNAEPPTTLDFAHRLYIIIDVASALHYLHKECEELVIHCDLKPSNILLDDVMVAHVSDFGIARLILAIGSTSHKNTSTIGVRGTVGYSPPEYGMGAEVSTCGDMYSFGILMLEMLTGRRPTDHTFEDGQNLHNFVAISFPGNLKKILDPHLLSMYAEVEMKDGNHENRIPAAKECLVSLFRIGLMCSMESPKERINIGDVTGELSIIRKAFLAGAQTRN 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01190 841 Gene3D Phosphorylase Kinase; domain 1 508 608 - -
Mepo5g01190 841 Pfam Leucine rich repeat 373 430 IPR001611 GO:0005515
Mepo5g01190 841 SUPERFAMILY L domain-like 8 305 - -
Mepo5g01190 841 Gene3D Transferase(Phosphotransferase) domain 1 609 837 - -
Mepo5g01190 841 Pfam Protein kinase domain 529 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01190 841 ProSiteProfiles Leucine-rich repeat profile. 445 467 IPR001611 GO:0005515
Mepo5g01190 841 SMART serkin_6 527 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01190 841 SUPERFAMILY Protein kinase-like (PK-like) 501 826 IPR011009 -
Mepo5g01190 841 SMART LRR_sd22_2 244 270 - -
Mepo5g01190 841 SMART LRR_sd22_2 123 146 - -
Mepo5g01190 841 SMART LRR_sd22_2 99 122 - -
Mepo5g01190 841 SMART LRR_sd22_2 443 464 - -
Mepo5g01190 841 SMART LRR_sd22_2 195 221 - -
Mepo5g01190 841 SMART LRR_sd22_2 395 421 - -
Mepo5g01190 841 SMART LRR_sd22_2 347 373 - -
Mepo5g01190 841 Pfam Leucine Rich repeats (2 copies) 101 141 IPR025875 -
Mepo5g01190 841 Gene3D Ribonuclease Inhibitor 220 488 IPR032675 -
Mepo5g01190 841 SUPERFAMILY RNI-like 230 466 - -
Mepo5g01190 841 FunFam LRR receptor-like serine/threonine-protein kinase EFR 498 608 - -
Mepo5g01190 841 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 10 118 - -
Mepo5g01190 841 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 318 475 - -
Mepo5g01190 841 Gene3D Ribonuclease Inhibitor 10 123 IPR032675 -
Mepo5g01190 841 FunFam Leucine-rich repeat receptor protein kinase EMS1 119 213 - -
Mepo5g01190 841 Pfam Leucine rich repeat N-terminal domain 9 48 IPR013210 -
Mepo5g01190 841 PANTHER OS04G0122200 PROTEIN 481 830 - -
Mepo5g01190 841 ProSiteProfiles Protein kinase domain profile. 527 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01190 841 ProSitePatterns Protein kinases ATP-binding region signature. 533 556 IPR017441 GO:0005524
Mepo5g01190 841 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 609 839 - -
Mepo5g01190 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Mepo5g01190 841 Gene3D Ribonuclease Inhibitor 124 219 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01190 Mepo-Chr5 12083659 12086904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01190 6 839 Receptor kinase-like Gene Family AT3G47570 35.224 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo5g01190 Pkinase 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01190 - - ccaj:109792361 887.486