Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01189 ATGCCATCTTCTGATTCAGCAGCAACAATTGAACTTCTGGTTAAGGTTTCATATAAAAACTTGTATGATGGAACCGACGGATTCTCAACAAGAAACTTGATAGGGTCTGGAAATTTTGGCCCTGTCTACTTAGGAACTCTTGAGTTAGAGGATAAAGTTGTAGCCATGAAGGTTTTGAAACTTCAGAAGAAGGGAGCTGACAAAAGTTTTATTGTTGAATGCAATGAACTCAAAAACATTAGGCACCGAAACTTGGAAAAGTATCTTCACCACGAATGTGAGCAACCTGTCATTCATTGCGATTTAAAGCCTAGCAATGTTCTTCTTGATGATTCTATGGTATCTCATGATATGGAAGCAACATCATCTACTGCTCAAGTTCATGGAGTTCTTACCCAACAGAAGGAAGAACAAGGATGCCGGGGATCAAACATAGGGGCAACCACTCCTGGCAAAAAAACCAGGGGTAGAGCCAGGAAATGCTCCTGGCAAATTGCAAAAGCATATGGCGGCAATGATTTCCACCTACCAAGGGACAAACAATCTGAATTTCTTCCATTTGTCATTAAGGGTGACGTTGTTGGATTCATTCACAATCGAGTGAAGACAGCTGAGGAAAGAACCAGCGCAGTTGGCTATGTAATCGAGCATTTTGGGGAGAAGCATATTCCAGAATGCGTCAGAAAAGCACACAATTTGCCAGGGGTTGAGCCAGGGCCTGTGCCAGGAGCGCGTTTGCCAGGAGCTAAAGCTCTGGCAAGTTCATTTGCAATGAGCAGATTTGCTGGTGATTCTGCTCCTGGCATAACTCCTGGCAAACATCCAGTTGCCAAGGCTTTTAGCATTTTGCTAGAGCTTCTGCCCCTGGTACAAAACAGTTGTGCCTGGGCGCATCCAGTTGAGTCAAAACAGTTTCGCTACTGCCAGTTTGCGCCTGGGCGCAAAACAGTTGTGCTTGGGCTATAG 966 0.4462 MPSSDSAATIELLVKVSYKNLYDGTDGFSTRNLIGSGNFGPVYLGTLELEDKVVAMKVLKLQKKGADKSFIVECNELKNIRHRNLEKYLHHECEQPVIHCDLKPSNVLLDDSMVSHDMEATSSTAQVHGVLTQQKEEQGCRGSNIGATTPGKKTRGRARKCSWQIAKAYGGNDFHLPRDKQSEFLPFVIKGDVVGFIHNRVKTAEERTSAVGYVIEHFGEKHIPECVRKAHNLPGVEPGPVPGARLPGAKALASSFAMSRFAGDSAPGITPGKHPVAKAFSILLELLPLVQNSCAWAHPVESKQFRYCQFAPGRKTVVLGL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01189 321 SUPERFAMILY Protein kinase-like (PK-like) 9 114 IPR011009 -
Mepo5g01189 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Mepo5g01189 321 Pfam Protein tyrosine and serine/threonine kinase 31 89 IPR001245 GO:0004672|GO:0006468
Mepo5g01189 321 Gene3D Phosphorylase Kinase; domain 1 3 90 - -
Mepo5g01189 321 PANTHER OS04G0122200 PROTEIN 13 85 - -
Mepo5g01189 321 Gene3D Transferase(Phosphotransferase) domain 1 91 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01189 Mepo-Chr5 12070179 12078988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01189 6 89 Receptor kinase-like Gene Family AT3G47570 54.118 5.10e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo5g01189 PK_Tyr_Ser-Thr 3.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01189 - - vun:114166412 134.035