Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01188 ATGTCGCCTCTTGATGTATATAGTGATACAGATGAGGTGGAATTTAATAGTGGAAACCAGAGTGATTATTTGACATTGCTCAAGTTTAAGAAATCTATATCCAATGACCCACATAGAATCCTTGATTCTTGGAATGGTTCTATCCATTTTTGCAACTGGCATGGGATCACATGTAACCCCATGCATCAAAGAGTTACATCGTTAAAGTTACCTGGATATAAATTGCATGGATCCTTTTCTCCTCATGTTGCCAATCTCACTTTTCTCATACACATCAACCTTGCAGGCAACAAATTCTCAGGAAAAATCCCACAAGAGTTTGGTCAGTTTAATTTGCAAGCAGTTTCTATATCCCATAATAATTTTGGAGGTAGTTTGCCAAGTTTCATCGGTAATTTTACCACCCAACTTAGTCGACTGTATTTTGCAAGCAATCAAATATCAGGGAAAATTCCTTTAGAAATAGGAAATCTAAATAGTTTAATTCTATTGAGCTTGAAAAATAACTATTTTGAAGGGACGATTCCTTCAACTATTGGGAAGTTTCAAAAGATGCAAGTACTAGATTTGCATGGAAATAAGCTGTCAGGAGAAATACCATCCTCCATAGGCAACCTCAGTCAAATGTATCATTTGAATTTAGGGAAAAATATGTTCGAAGGAAATATTCCGTCAAGTATAGGCAACTTTCAAAAGTTACAAATGTTATACCTTTCAAGAAACAACCTCAGAGGAGACATACCTTCAGAGGTTTTGAGTCTTTCATCTTTAACAACAGGATTGTTCTTATCCCAAAACTTTTTGAGTGGAAGTCTACCTGATGAAGTCGGTCAACTACAAAATATTGTGCAGATTGATGTCTCTAAAAATCAGTTGTTTGGTGAGATTCCTAGAACCTTGGGAGAATGCTTAAGCTTAGAATACCTTATTTTGACAGGGAATTCATTCAATGGAAGTATACCATCCTCTTTGGAATCTCTCAAAGGTCTTCGAGTGTTAGACCTTTCAAGAAACCAATTATCCGGATCAATTCCAAAAGTTTTGCAAAATATTTCTTCGATAGAATACTTCAATGCATCATTCAACATGTTGGAAGGAGAGGTACCAACTAAAGAAATAGGAAATCTAAATAATTTAATTCTATTGACCATGGAAAATAACCATTTTGAAGGGAATATTCCTTCTACTATTGGCAATTTTAAAAAGATGCAAGTGTTAGATTTGCGTGGAAACAAGATGTCAGGAAATATTCCATCCTCCATAGGCAACCTCAGTCAGCTGTATCATTTGGGCTTAGGGAAAAATATGTTACAAGGAAATATTCCTTCAAGTGTAGGGAAGTGCAAAAACCTACAAATGTTATACCTTTCAGAAAACAAACTTACTGGAGTCATACCCCCAGAGGTATTCAATCTTTCATCTTTAACAACAGGATTGTTCTTATCACTGAACATGTTGAGTGGTAAACTATCCGATGAAGTTGGCCATTTACAGAATATTGGGCAAATTGATGTCTCTGAAAATCGTCTGTCTGGTGAAATTCCAGAAACATTGGGTGAATGTGAAAGCTTAGAATATCTTCTTTTGAATGGGAACTCATTCAACGGAAGCATACCATCCTCTTTGGAATCTCTCAAAGGTCTTCGGTATTTAGACCTTTCAAAAAATCAATTGTCGGGTTCAATTCCAAAAGGTCTGCAGAATATTTCTTTCTTAGAATACTTCAATGCATCTTTCAACAGTTTAGAAGGAGAGGTACCAACTGAAGGTGTCTTTCGAAATGCAAGTGAATTAGCAGTGACTCGAAACAATAAACTTTGTGGAGGAATTTTGGAGTTGCATCTGCCGCCATGCCCTAAAGCTATGAAACCTGCAAGACACCATAACATTAAGTTGATGGTTGTGATAGTTAGTGCAGTTTCTTTTGTTATCATTACACTATTTATTCTCACTATCTATTTGATGAGGCGAACAAAAAAGACACCATCATTTGATTCACCAATTGATGATATTATGGTTCAGGTTTCATACCAAAACCTGCATACTGCAACCAATGGGTTTTCAACAAGCAACTTGATAGGATTAGGAAATTTTGGTTCTGTCTACAAAGGAACAATTGAGTCGATTTGTGGAGTTGTTGCCATAAAAGTCCTAAATCTTAAAAAGAAGGGAGCTACCAAGAGTTTCATTGCTGAATGTAATGCACTAAAAAATATTAGACACCGAAATCTTATTAAAGTTTTGACATGTTGTTCCAGCACAGATTACAATGGCAATGAGTTCAAAGCTCTCGTATTTGAGTACATGACAAATGGAAACCTAGAAAGTTGGTTGCATCCAACAATAGACAAGCCCAAATCATTCAATCTTGAGCAAAGGTTAAATGTTATTGCTGATGTTGCTTCAGCACTTTGTTATCTTCACTTTGAGTGCGAGCAACCTGTTATTCATTGTGATTTAAAGCCGGAAAATGTTCTACTTGATGACTCCATGGTAGCTAAAGTTAGTGATTTTGGCTTAGCAAGGTCGATCTCAGGTGATGAAGTCTCAAAAATGCAAAGTAGCACAATTGGAATAAAGGGGACAGTTGGTTATGCGCCCGTAGAGTATGGAATGGGATCTGAGGTGTCAATTGAAGGTGACGTGTATAGCTTTGGAATACTGATATTGGAAATGTTAACTGGAAGGAGACCCACAGATGAAATGTTCAAAGATGATCATAATCTCCATAATTATGTGAAACATTCCATTCCAAATCACCTTTTCGAGATTGTGGACCGGTCTATTCTCCCAATTGAATTAGAACACAATGCTCACAATGGGAACACTTGCAGTATACATCCCAACGTTGAGAAATGTTTACTTTCAATTTTTAGGATTGCACTTTCATGTTCAGTGGAATCACCAAAAGAAAGAATGAGTATGGTTGATGTTATAAGGGAGCTCAATATCATTAAAAGTTTCTTTCCTACTGAGGTTCAATGA 2985 0.3635 MSPLDVYSDTDEVEFNSGNQSDYLTLLKFKKSISNDPHRILDSWNGSIHFCNWHGITCNPMHQRVTSLKLPGYKLHGSFSPHVANLTFLIHINLAGNKFSGKIPQEFGQFNLQAVSISHNNFGGSLPSFIGNFTTQLSRLYFASNQISGKIPLEIGNLNSLILLSLKNNYFEGTIPSTIGKFQKMQVLDLHGNKLSGEIPSSIGNLSQMYHLNLGKNMFEGNIPSSIGNFQKLQMLYLSRNNLRGDIPSEVLSLSSLTTGLFLSQNFLSGSLPDEVGQLQNIVQIDVSKNQLFGEIPRTLGECLSLEYLILTGNSFNGSIPSSLESLKGLRVLDLSRNQLSGSIPKVLQNISSIEYFNASFNMLEGEVPTKEIGNLNNLILLTMENNHFEGNIPSTIGNFKKMQVLDLRGNKMSGNIPSSIGNLSQLYHLGLGKNMLQGNIPSSVGKCKNLQMLYLSENKLTGVIPPEVFNLSSLTTGLFLSLNMLSGKLSDEVGHLQNIGQIDVSENRLSGEIPETLGECESLEYLLLNGNSFNGSIPSSLESLKGLRYLDLSKNQLSGSIPKGLQNISFLEYFNASFNSLEGEVPTEGVFRNASELAVTRNNKLCGGILELHLPPCPKAMKPARHHNIKLMVVIVSAVSFVIITLFILTIYLMRRTKKTPSFDSPIDDIMVQVSYQNLHTATNGFSTSNLIGLGNFGSVYKGTIESICGVVAIKVLNLKKKGATKSFIAECNALKNIRHRNLIKVLTCCSSTDYNGNEFKALVFEYMTNGNLESWLHPTIDKPKSFNLEQRLNVIADVASALCYLHFECEQPVIHCDLKPENVLLDDSMVAKVSDFGLARSISGDEVSKMQSSTIGIKGTVGYAPVEYGMGSEVSIEGDVYSFGILILEMLTGRRPTDEMFKDDHNLHNYVKHSIPNHLFEIVDRSILPIELEHNAHNGNTCSIHPNVEKCLLSIFRIALSCSVESPKERMSMVDVIRELNIIKSFFPTEVQ 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01188 994 Pfam Protein kinase domain 689 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01188 994 ProSiteProfiles Protein kinase domain profile. 687 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01188 994 FunFam LRR receptor-like serine/threonine-protein kinase EFR 658 768 - -
Mepo5g01188 994 PRINTS Leucine-rich repeat signature 330 343 - -
Mepo5g01188 994 PRINTS Leucine-rich repeat signature 545 558 - -
Mepo5g01188 994 Gene3D Phosphorylase Kinase; domain 1 668 768 - -
Mepo5g01188 994 FunFam Leucine-rich repeat receptor protein kinase EMS1 177 273 - -
Mepo5g01188 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 769 994 - -
Mepo5g01188 994 PANTHER OS04G0122200 PROTEIN 371 983 - -
Mepo5g01188 994 SUPERFAMILY L domain-like 44 367 - -
Mepo5g01188 994 Pfam Leucine Rich Repeat 548 568 IPR001611 GO:0005515
Mepo5g01188 994 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Mepo5g01188 994 Gene3D Ribonuclease Inhibitor 78 371 IPR032675 -
Mepo5g01188 994 Gene3D Ribonuclease Inhibitor 372 619 IPR032675 -
Mepo5g01188 994 Gene3D Ribonuclease Inhibitor 13 77 IPR032675 -
Mepo5g01188 994 SMART LRR_sd22_2 400 426 - -
Mepo5g01188 994 SMART LRR_sd22_2 448 474 - -
Mepo5g01188 994 SMART LRR_sd22_2 545 571 - -
Mepo5g01188 994 SMART LRR_sd22_2 182 208 - -
Mepo5g01188 994 SMART LRR_sd22_2 327 353 - -
Mepo5g01188 994 SMART LRR_sd22_2 134 160 - -
Mepo5g01188 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Mepo5g01188 994 FunFam LRR receptor-like serine/threonine-protein kinase EFR 371 623 - -
Mepo5g01188 994 FunFam Leucine-rich repeat receptor-like protein kinase 19 176 - -
Mepo5g01188 994 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Mepo5g01188 994 Gene3D Transferase(Phosphotransferase) domain 1 769 990 - -
Mepo5g01188 994 FunFam Leucine-rich repeat receptor protein kinase EMS1 274 370 - -
Mepo5g01188 994 SMART LRR_typ_2 327 350 IPR003591 -
Mepo5g01188 994 SMART LRR_typ_2 545 568 IPR003591 -
Mepo5g01188 994 SMART LRR_typ_2 230 254 IPR003591 -
Mepo5g01188 994 SMART LRR_typ_2 424 448 IPR003591 -
Mepo5g01188 994 SMART LRR_typ_2 449 472 IPR003591 -
Mepo5g01188 994 SMART LRR_typ_2 497 521 IPR003591 -
Mepo5g01188 994 SMART LRR_typ_2 182 206 IPR003591 -
Mepo5g01188 994 SMART LRR_typ_2 279 303 IPR003591 -
Mepo5g01188 994 SUPERFAMILY L domain-like 296 616 - -
Mepo5g01188 994 Pfam Leucine rich repeat 305 364 IPR001611 GO:0005515
Mepo5g01188 994 SUPERFAMILY Protein kinase-like (PK-like) 663 984 IPR011009 -
Mepo5g01188 994 SMART serkin_6 687 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01188 Mepo-Chr5 12058388 12069298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01188 19 989 Receptor kinase-like Gene Family AT3G47570 40.462 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo5g01188 Pkinase 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01188 - - gmx:100792724 1052.74