Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01186 ATGCCTGAAGATATTCCTAAAGAAATATGTCGTAACAAAAACTTGATAGCGATAGTAATGGGCGTCAATAAATTGTCTGGTACATTTCCTTCTTGTCTTTACAATATGTCATCTCTTATTATGATCTCAGCTACAGTGAATCAGTTTGACGGCGTTCTTTCATCCAACATGTTCAACACACTTCCTAATCTTCAATCATTTGGAATTGGTGGCAATCAATTTTCAGGTCTAATGCCCATTTCTGTTGCAAATGCTTCTAACCTGACAATACTTGATATCAGCGCAAACAATTTTTTTGGACAAGTTCCAATTCTTGAGAGGCTACAAAATATTCGTATTATAAATTTGGAAAAAAATGATTTTGGTGATAATTCAACTAAGGATTTGGAATTTTTAAAATCACTAACAAATTGTAGTAAGTTGGAAGTGGTTTCTATATTTAGTAATAATTTTGGAGGTAGTTTGCCTAGTTTCATAGGTAATTTCACCACACAACTTAGTCGTCTGTATCTTGGGGATAATCAAATATCTGGGAAAATTCCGTTAGAATTAGGAAATCTAAATAGTTTAATTCTTTTGACCATGGATAACAACCGTTTTGAAGGAACGATTCCTTCAACTGTTGGGATGTTTCAAAAGATGCAAGTGTTAGATTTGGGTGGAAACAAGTTGTCAGGAGAAATACCATTCTCCATAGGAAACCTTAGTCAACTGTATAATTTGGGTTTAGGACAAAATATGTTAGAAGGAAATATTCCTTCAAGTATAGGGAACTGTCAAAAGTTACAAATGTTATTCCTTTCAAAAAACAACCTTAGAGGAGCCATACCATCAGAAGTTTTCAACCTTTCATCTTTAACAATAGGATTGTACTCACAAAACTTGTTGAGTGGCAGTCTAACTGATGAAGTAGTTCATCTAAAAAATATCATGAACTTTGATGTCTCTGAAAATCGTTTGTCCGGTGAAATTCCTGAAAGCATGGGTAAATGCATAAGGTTAGAATACCTTGTTTTGAAACGAAACTCATTCAATGGAAGCATACCCTACTCTTTGGCATCACTCAAAAGTCTTCGAGTGTTGGATCTTTCAGAAAACCAATTATCCGGATCAATTCCAAAAGTTTTGCAAAATATTTCTTCCATAGAATACTTTAATGCATCATTCAACATGTTGGAAGGAGAGGTACCAACTAAAGGTATCTTTCGAAATGCTAGTGCAATCACAGTTATTGGAAACAATAAGCTTTGTGGAGGAATTTTAGAGTTCCATCTACCGCCCTGCTCTAAACCTGCAAAACACCATAACTTCAAATTGATGGTAGGGATATGTAGTGTCGTTTCTCTTCTTTTCATTATGATATCTTTACTAACTATCTATTGGAAAAGGAGAACGATACAAAATGCATCTTTGGATTCACCAATAAATGATCAGATGGTTAAGGTTTCGTACCAAAACCTACACCAAGCAACCAATGGGTTCTCGACAAGCAACTTGATAGGATCTGGATATTTTGGTTCTGTATACAAAGGAACACTTGAGTCGGTAGGTGGAGATGTTGCCATTAAAGTCTTAGACCTTAAAAAGAAGGGAGTTCACAAGAGTTTCATTACTGAATGTAATGCACTGAAAAATATTAGACACCGAAATCTAGTTAAAATTTTGACATGTTGTTCCAGCACAGATTACAAAGGCAGTGAGTTTAAAGCTCTCATATTTGAGTACTTGAGAAATGGAAACTTAGAAAGTTGGTTGCATCCTACACCTGAAATTACAGATCAACACAAATCACTGACTCTTGAGGAAAGGTTAAATATTATTACTGATGTTGCGTCAGCATTTTGTTATCTTCACTACGAATGCGAGCAGCCTGTCATTCATTGTGATTTAAAGCCTGCAAATATTCTTCTTAATGACTTCATGGTAGCTCAAGTGAGTGATTTTGGGTTAGCAAAGTTGCTCTCAAGTGTTGGAGTCTCTCTGATGCAGAGTAGCACAATCGGAATAAAGGGGACAGTTGGCTATGCACCCCCAGGTTCGTCTGATGCTGTTCTATTAAGTTGTCAAATTTATGAGTTTTAA 2082 0.3554 MPEDIPKEICRNKNLIAIVMGVNKLSGTFPSCLYNMSSLIMISATVNQFDGVLSSNMFNTLPNLQSFGIGGNQFSGLMPISVANASNLTILDISANNFFGQVPILERLQNIRIINLEKNDFGDNSTKDLEFLKSLTNCSKLEVVSIFSNNFGGSLPSFIGNFTTQLSRLYLGDNQISGKIPLELGNLNSLILLTMDNNRFEGTIPSTVGMFQKMQVLDLGGNKLSGEIPFSIGNLSQLYNLGLGQNMLEGNIPSSIGNCQKLQMLFLSKNNLRGAIPSEVFNLSSLTIGLYSQNLLSGSLTDEVVHLKNIMNFDVSENRLSGEIPESMGKCIRLEYLVLKRNSFNGSIPYSLASLKSLRVLDLSENQLSGSIPKVLQNISSIEYFNASFNMLEGEVPTKGIFRNASAITVIGNNKLCGGILEFHLPPCSKPAKHHNFKLMVGICSVVSLLFIMISLLTIYWKRRTIQNASLDSPINDQMVKVSYQNLHQATNGFSTSNLIGSGYFGSVYKGTLESVGGDVAIKVLDLKKKGVHKSFITECNALKNIRHRNLVKILTCCSSTDYKGSEFKALIFEYLRNGNLESWLHPTPEITDQHKSLTLEERLNIITDVASAFCYLHYECEQPVIHCDLKPANILLNDFMVAQVSDFGLAKLLSSVGVSLMQSSTIGIKGTVGYAPPGSSDAVLLSCQIYEF 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01186 693 PANTHER OS04G0122200 PROTEIN 5 684 - -
Mepo5g01186 693 Pfam Protein kinase domain 495 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01186 693 Pfam Leucine rich repeat 333 392 IPR001611 GO:0005515
Mepo5g01186 693 ProSiteProfiles Protein kinase domain profile. 494 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01186 693 SUPERFAMILY L domain-like 163 418 - -
Mepo5g01186 693 Gene3D Ribonuclease Inhibitor 2 134 IPR032675 -
Mepo5g01186 693 Gene3D Ribonuclease Inhibitor 135 430 IPR032675 -
Mepo5g01186 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Mepo5g01186 693 ProSitePatterns Protein kinases ATP-binding region signature. 500 523 IPR017441 GO:0005524
Mepo5g01186 693 FunFam LRR receptor-like serine/threonine-protein kinase EFR 465 575 - -
Mepo5g01186 693 Gene3D Phosphorylase Kinase; domain 1 457 575 - -
Mepo5g01186 693 FunFam LRR receptor-like serine/threonine-protein kinase EFR 127 434 - -
Mepo5g01186 693 Gene3D Transferase(Phosphotransferase) domain 1 576 689 - -
Mepo5g01186 693 SUPERFAMILY RNI-like 4 229 - -
Mepo5g01186 693 SMART serkin_6 494 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01186 693 SMART LRR_sd22_2 163 184 - -
Mepo5g01186 693 SMART LRR_sd22_2 211 237 - -
Mepo5g01186 693 SMART LRR_sd22_2 355 381 - -
Mepo5g01186 693 SMART LRR_sd22_2 259 285 - -
Mepo5g01186 693 SUPERFAMILY Protein kinase-like (PK-like) 469 678 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01186 Mepo-Chr5 12042002 12044083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01186 4 678 Receptor kinase-like Gene Family AT3G47570 43.271 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo5g01186 Pkinase 1.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01186 - - gmx:100792724 859.751