Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01160 ATGGCAACAATGGGTGGTGAGACTTTGAAGGCCCATCTAAGCATGGCACTCTTACAGCTTTTCAATGGTGGATACTATGTTATTACTAAAGTAGCCCTCAATGATGGAGTCAACCAATTAGTCTTTTGCTTCTATAGAGATCTCATTGCCCTCCTCATTCTTTCTCCCATTGCTTTTTTCAAAGAAAGACAGACAAGGCCACCCTTTACTAAGCAGCTATTCATGTCATTCTTCTTTCTTGGATTAATTGGGATATTTGGCAGCCAGGTGTTGTTTCTCTATGGTTTAGGTTATACAAATCCAACTTATGCCTCTGCCTTACAGCCTTCTATTCCTGTCTTTACCTTTCTACTTGCTGTCATCATGGGTGTAGAAAGAGTGAATCTGCAGAGTTTTGAAGGTCTGACTAAGGTTGGAGGGACTGTTATATGTGTTTCTGGCGCCATATTTATGGCTTTGTACCGCGGTCCATCGTTGATAGGATATACCGAACCCGTGATCATACCACAGAATGAAATATTTGTCAGTGGTCAGCCAGAGCCTTTAGGATGGTTGATTACTGGTTTACTGAATCTTGGATTGGAAAATTTTGAACTTGGAGTTATGTTCTTGATAGGTAACTGCACAGGCATGGCTGCTTTCCTAGCCATTCAGGCGCAGGTACTAAAAAAGTATCCTGCATATCTATCTGTGACAGCATTTTCATTCTTCTTTGGCGTTGCACTAATGGCAATAGTCTCGTTATTCACGACTAATTTGTCATCTGACTGGATTTTGACACAATCAGAAATACTTGCGGTTGTTTATGCTGGAACTATTACATCAGCCATTAATTATGCAGTCATGAGTTGGAGCAACAAGATATTAGGGCCAACTCTGGTTGCCCTTTACATTCCACTTCAACCTGGATTTGCTGCCATACTGTCTCAGATATTCCTTGGAAGTCCAATTTACTTGGGAAGTATCATAGGGGGTTTTTTGATCATTGCTGGTCTCTTTGGTGTTACCTGGGCATCTTATAAAGAAAGACAGGCAACTGTTGGAATTTATTCTCATGTCTCCAGGGTCTCTGAACCACTTATTCATGAAAAAAGTGCACACCAAAGAGATCATATATTTCCGGGGTCCTCCAGCGCATCCACAGCCGCAAGATCATGTGATTAA 1164 0.4141 MATMGGETLKAHLSMALLQLFNGGYYVITKVALNDGVNQLVFCFYRDLIALLILSPIAFFKERQTRPPFTKQLFMSFFFLGLIGIFGSQVLFLYGLGYTNPTYASALQPSIPVFTFLLAVIMGVERVNLQSFEGLTKVGGTVICVSGAIFMALYRGPSLIGYTEPVIIPQNEIFVSGQPEPLGWLITGLLNLGLENFELGVMFLIGNCTGMAAFLAIQAQVLKKYPAYLSVTAFSFFFGVALMAIVSLFTTNLSSDWILTQSEILAVVYAGTITSAINYAVMSWSNKILGPTLVALYIPLQPGFAAILSQIFLGSPIYLGSIIGGFLIIAGLFGVTWASYKERQATVGIYSHVSRVSEPLIHEKSAHQRDHIFPGSSSASTAARSCD 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01160 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 341 - -
Mepo5g01160 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
Mepo5g01160 387 Pfam EamA-like transporter family 11 136 IPR000620 GO:0016020
Mepo5g01160 387 Pfam EamA-like transporter family 199 336 IPR000620 GO:0016020
Mepo5g01160 387 PANTHER WAT1-RELATED PROTEIN 13 350 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01160 Mepo-Chr5 11752352 11758889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01160 95 368 Nodulin-like Gene Family AT5G45370 57.554 3.02e-109 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01160 - - gmx:100787738 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01160 5 11752352 11758889 Mepo5g01160 5 11752352 11758889 ECH