Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01147 ATGGCCGCCGCCGCCGCAGCAGCAGCACGTCCCCTTGTCACAATCCAAACCCTAGAATCGGAAATGTCCTCCGATTCACCAACCACCCTTCCAATTCCCGATGTCATGCGTGCTTCAATCCGTCCTGACATCGTCAACTTCGTCCATTCCAACATCTCCAAAAACTCCCGACAACCCTACGCCGTCAGCCGTAAAGCTGGTCATCAAACCTCAGCTGAATCTTGGGGTACTGGACGTGCTGTTTCACGTATTCCTCGTGTTGCTGGTGGTGGGACCCACCGTGCTGGTCAGGCTGCTTTTGGTAACATGTGTCGTGGTGGTAGAATGTTTGCTCCCACAAGGATCTGGAGGAAATGGCATAGGAAGATTAATGTTAATCAGAAACGTTATGCTGTTGTTTCAGCTATAGCAGCTTCTGCTATTCCTTCATTGGTTCTTGCTCGTGGTCATAGGATTGAGACTGTTCCTGAGTTTCCTCTTGTTGTTGGTGATGCTGCTGAAGGTGTAGAGAAAACTAAGGAGGCTATTAAGGTTTTGAAGCAGGTTGGTGCTTTTGCTGATGCTGAAAAGGCTAAGGATAGCCTTGGGATTCGACCCGGAAAGGGGAAGATGAGGAATAGGCGATATATATCGCGAAAGGGACCGTTGATTGTTTATGGTACTGAAGGGGCGAAGGCGGTTAAGGCTTTTAGGAATATTCCTGGTGTTGAGATTACTAATGTGGAGAGGTTGAATCTGTTGAAGCTTGCACCGGGTGGGCATTTAGGGAGATTTGTGGTTTGGACTAAGTCCGCTTTTGAGAAATTGGATTCGATTTATGGGACGTTTGATAAGGGTTCGGAGAAGAAGAAAGGGTATGTGTTACCTAGGGCTAAGATGGTGAATTCTGATTTGACTAGGATTATTAATAGTGATGAGGTGCAGAGTGTTGTGAGGCCGATTAAGAAGGATGTTAAGAGGGCTACGCTTAAGAAAAATCCTCTTAAGAATCTTAATGTTATGCTCAGGCTTAATCCTTATGCCAAGACTGCTAAGAGGATGGCTTTGCTTGCTGAGGCTGAAAGGGTTAAGGCTAAGAAGGAGAAGCTTGACAAGAAGAGGAAGACTGTCTCTAAGGAGGAAGCTTCTGCCATCAAGGCTGCAGGGAAAGCTTGGTATAACACCATGGTCTCAGATTCTGATTATGCTGAATTTGACAACTTCACTAAATGGCTTGGGGTTTCTCAGTAA 1230 0.4634 MAAAAAAAARPLVTIQTLESEMSSDSPTTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEITNVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKAKKEKLDKKRKTVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFTKWLGVSQ 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01147 409 Pfam Ribosomal protein L4/L1 family 32 270 IPR002136 GO:0003735|GO:0005840|GO:0006412
Mepo5g01147 409 SUPERFAMILY Ribosomal protein L4 26 271 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mepo5g01147 409 Coils Coil 346 373 - -
Mepo5g01147 409 FunFam 60S ribosomal protein L4 7 312 - -
Mepo5g01147 409 ProSitePatterns Ribosomal protein L1e signature. 124 150 IPR013000 -
Mepo5g01147 409 Pfam 60S ribosomal protein L4 C-terminal domain 284 356 IPR025755 -
Mepo5g01147 409 PANTHER 60S RIBOSOMAL PROTEIN L4 8 402 IPR045240 -
Mepo5g01147 409 Gene3D - 7 312 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mepo5g01147 409 MobiDBLite consensus disorder prediction 58 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01147 Mepo-Chr5 11623106 11626785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01147 5 409 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 82.222 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01147 K02930 - gmx:100779764 711.835