LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g01142	ATGCTTTCCATTCAGTGTCGCCGCCGGCACAAGTCCGACATGGCTTACCTCACCGCCCTCATTGGCATTCTTCTCCTCTTCCCGGCGGTAACCTCCCAAGCTCAAATCCTCAAAAAAGAAACTCACTTCTTTGGATTCTTCAACGACACCAATGATCACTATTTTCAACCATTATCCACCGCAACCATCCATTTCAACGCTCTTCAGGTCACTCCGGACAGCGCTGGAAGTTCAACCATCGTCCCCCTTTTCAACAACTCCGGCAGAGTCTTTTTCAAAGACCCCTTTAAACTCTGGGACGGCTCCGCCTCCACCGGAAAACTTGTCTCCTTCAATACTTCATTCCTCATCAACATCTTTCGCTACAACAACGGTACCCCGGGTGAAGGTCTTGCTTTCATCATCGCACCTTCTCTCACCATCCCCCTCAACAGCTTCGGTGGTTACCTAGGGTTAACAAACGCCACCACAGACGGAAACGTCAACAACCGTTTTGTCGCTGTTGAACTTGACACGGTTAAACAAGACTTTGATGATGACAATAACCACATCGGCCTCGACATAAACAGTGTTCGTTCCAACGTTAGTGTTCCTCTTGATTTGGAGCTCTCTCCGATCGGAACTAGATTCCATGTTTTATGGGTTGAATACGACGGTGACCGGAAAAATCTTAGTATCTACATGGCGGAACAACCTTCACAGGATTTACCTTCACAGGATTTACCTATAGTGAAAAAACCGGCTAAACCGATTATAAGTTCTGTTCTTGATCTAAGAAAAGTGGTGAGTCAAAATTCCTATTTTGGATTTTCTGCTTCAACGGGTGTTACCGTTGAGTTAAACTGTGTACTTAGATGGAATATTTCAATTGAAGTGTTTGATAATGATAAAAATGAAAAATATTTGAGTATTGGTTTAGGTGTTGGGATTCCTGTTTTGGTATTGATTTTAGGTGGTGGTGGATTTTGGTATTATTATTTATGTAAGAAGAAGAAGAGGGATGACAATGGTTCTACTTCTCAAATAATGGGTACATTGAAGAGTTTACCAGGTACACCAAGAGAGTTTAGTTTTCAAGAATTGAAGAAAGCTACAAATAATTTTGATGAAAAGCATAAACTTGGACAAGGTGGATATGGTGTTGTTTATAGAGGAACTTTACCTAAGGAAAAATTACAAGTTGCTGTTAAGATGTTTTCTAGAGATAAGATGAAAAGTACTGATGATTTCTTGGCTGAACTTACTATTATCAATCGTCTTCGTCATAGACATCTTGTTAAGTTACAAGGATGGTGCCACAAAAACGGAGTATTGCTCTTAGTATACGACTACATGCCTAACGGAAGCTTAGACAATCACATATTTTGCGAGGAAGGAACGAGCACAACCCCTCTAAGTTGGAATCTAAGGTACAAAATCCTCTCTGGTGTCGCTTCTGCATTGAATTACCTACACAACGAGTACGATCAAACCGTAGTCCATAGAGACCTTAAAGCAAGCAACATAATGCTAGACGTTGATTTCAATGCACGTTTAGGTGATTTCGGCTTAGCACGTGCACTAGAGAATGAAAAAACATCCTATGCAGAATTAGAAGGAGTACAAGGTACAATGGGATATATAGCACCAGAATGTTTCCACACAGGAAAAGCTTCAAGAGAATCAGATGTTTATGGACTTGGTGCTGTGTTTCTTGAAACAGTTTGTGGTCAAAGACCTTGGACTAAAATCGAAGGGTATCAATTTTTGGTTGATTGGGTTTGGTATTTACATCGTGAAGGAAGGATTTTAGAAGCAGTTGATCAAAGTGTTGGGAATGAGTATGATGTTGAAGAGGTAGAGAGGGTATTGAAATTGGGATTGGCTTGTTCTCATCCTATTGCTAGTGAGAGACCAAATTTGCAAATGATCGTTCAGATTTTATCTGGGTCAGTTAATGTGCCTCATGTGCCACCTTTTAAACCTTCTTTTATGTGGCCAGCTGTGGATTTAGCTAGTCTTGCAAGTACTGATTTTACAACAACAAATACTAGTGAGTATACACCAATCAATACTAATAACTCACAATCTTCTATGCATGTTGGATTCTCAGATAATAGTAGTTCTTTGGTCTAA	2115	0.4043	MLSIQCRRRHKSDMAYLTALIGILLLFPAVTSQAQILKKETHFFGFFNDTNDHYFQPLSTATIHFNALQVTPDSAGSSTIVPLFNNSGRVFFKDPFKLWDGSASTGKLVSFNTSFLINIFRYNNGTPGEGLAFIIAPSLTIPLNSFGGYLGLTNATTDGNVNNRFVAVELDTVKQDFDDDNNHIGLDINSVRSNVSVPLDLELSPIGTRFHVLWVEYDGDRKNLSIYMAEQPSQDLPSQDLPIVKKPAKPIISSVLDLRKVVSQNSYFGFSASTGVTVELNCVLRWNISIEVFDNDKNEKYLSIGLGVGIPVLVLILGGGGFWYYYLCKKKKRDDNGSTSQIMGTLKSLPGTPREFSFQELKKATNNFDEKHKLGQGGYGVVYRGTLPKEKLQVAVKMFSRDKMKSTDDFLAELTIINRLRHRHLVKLQGWCHKNGVLLLVYDYMPNGSLDNHIFCEEGTSTTPLSWNLRYKILSGVASALNYLHNEYDQTVVHRDLKASNIMLDVDFNARLGDFGLARALENEKTSYAELEGVQGTMGYIAPECFHTGKASRESDVYGLGAVFLETVCGQRPWTKIEGYQFLVDWVWYLHREGRILEAVDQSVGNEYDVEEVERVLKLGLACSHPIASERPNLQMIVQILSGSVNVPHVPPFKPSFMWPAVDLASLASTDFTTTNTSEYTPINTNNSQSSMHVGFSDNSSSLV	704

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g01142	704	Pfam	Protein kinase domain	369	639	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g01142	704	Gene3D	-	42	305	-	-
	Mepo5g01142	704	FunFam	probable L-type lectin-domain containing receptor kinase S.5	353	444	-	-
	Mepo5g01142	704	Gene3D	Transferase(Phosphotransferase) domain 1	445	648	-	-
	Mepo5g01142	704	FunFam	probable L-type lectin-domain containing receptor kinase S.5	445	646	-	-
	Mepo5g01142	704	Pfam	Legume lectin domain	45	299	IPR001220	GO:0030246
	Mepo5g01142	704	ProSiteProfiles	Protein kinase domain profile.	368	650	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g01142	704	CDD	STKc_IRAK	374	641	-	-
	Mepo5g01142	704	CDD	lectin_legume_LecRK_Arcelin_ConA	45	287	IPR001220	GO:0030246
	Mepo5g01142	704	ProSitePatterns	Protein kinases ATP-binding region signature.	374	397	IPR017441	GO:0005524
	Mepo5g01142	704	MobiDBLite	consensus disorder prediction	680	704	-	-
	Mepo5g01142	704	SUPERFAMILY	Protein kinase-like (PK-like)	350	676	IPR011009	-
	Mepo5g01142	704	SMART	serkin_6	368	640	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo5g01142	704	ProSitePatterns	Legume lectins beta-chain signature.	166	172	IPR019825	-
	Mepo5g01142	704	PANTHER	-	72	652	-	-
	Mepo5g01142	704	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	492	504	IPR008271	GO:0004672\|GO:0006468
	Mepo5g01142	704	SUPERFAMILY	Concanavalin A-like lectins/glucanases	47	297	IPR013320	-
	Mepo5g01142	704	Gene3D	Phosphorylase Kinase; domain 1	353	444	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g01142	Mepo-Chr5	11554584	11558634	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g01142	86	657	Receptor kinase-like Gene Family	AT5G55830	38.424	9.43e-126	387

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mepo5g01142		Pkinase	3.1e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g01142	-		-	tpra:123907446	1107.05