LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo5g01132	ATGGGCTCCGATAGAACATCTGTTGCTCTAGCTCAAGCTTTCAAGGCTGCTCAAAGATACTCACCAACAATACTTCTACTTCGTCATTTTGAGGTTTTTCGAGATTCACAATCACCTGAAGTTTCACAAAATGATCAAAGAGGAAATACATCTGAAGTTGCATCAGTGATTAGGAGATTCACTGAGCCAGTTGGTGAACATGGTGATAGTAACTCCCTGGGGAAATCAAATGGTGAATTTGTAAGATATAACAATTCTGAAAAGACAAGCGGGCATCAGGTCCTATTGATTGCTGCTGCTGACAGTTCAGAGGGTCTGCCTTCAGGCATCAGACACTGCTTTAGCCACGAAATAAAGATGGGGCCTTTGACAGAAGAGCAAAGGGCTGAAATGCTGTTGCATTCACTGCAAAATGTTTATGGACTCCACTCTAATACTGATTTAGAGGGCTTTGTAAAAGAAATAGTTGGACAGACATCTGGTTTCATGCCCAGGGATATGTGTGCTTTAATTGCGGATGCTGGTGCCAACTTATTTCATGGGAGCTATGTTGAAGTAGACAAAGATCAACCCGAAGACTCAGATAGTTCTCTTATTTCTGAGGTGACGAAGGACAACAATGAGCCAGAAGTTTCAGCTCGGAAACCTGGTAAAGAAGACTTGGTGAATTCTTTGGAACGATCAAAGAAAAGAAATGCGTCAGCATTGGTATGGATTTTTATGCAAGTTCCGAATGTAAAATGGGAAGATGTTGGCAGGCTTGAAGATGTCAAAAAATCAATCCTGGATACTGTTCAGTTGCCTCTCTTGCATAAAGATCTATTTGCATCTGGATTACGCAAGCGGTCTGGTGTTCTTTTGTACAGTCCCCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCCACAGAATGTTCCTTAAATTTTCTTAGTCTGAAAGGTCCTGAACTGATCAACATGTACATAGGAGAGTCTGAGAAGAATGTTCGAGACATTTTTCAGAAGGCCAGATCAACACGTCCATGTGTCATCTTCTTTGATGAACTTGATTCTCTTGCACCAGCTCGGGGAGCTTCCGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCGCAGATGCTTGCAGAAATTGACGGCTGA	1143	0.4243	MGSDRTSVALAQAFKAAQRYSPTILLLRHFEVFRDSQSPEVSQNDQRGNTSEVASVIRRFTEPVGEHGDSNSLGKSNGEFVRYNNSEKTSGHQVLLIAAADSSEGLPSGIRHCFSHEIKMGPLTEEQRAEMLLHSLQNVYGLHSNTDLEGFVKEIVGQTSGFMPRDMCALIADAGANLFHGSYVEVDKDQPEDSDSSLISEVTKDNNEPEVSARKPGKEDLVNSLERSKKRNASALVWIFMQVPNVKWEDVGRLEDVKKSILDTVQLPLLHKDLFASGLRKRSGVLLYSPPGTGKTLLAKAVATECSLNFLSLKGPELINMYIGESEKNVRDIFQKARSTRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDG	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo5g01132	380	Pfam	ATPase family associated with various cellular activities (AAA)	285	380	IPR003959	GO:0005524\|GO:0016887
	Mepo5g01132	380	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	9	189	IPR027417	-
	Mepo5g01132	380	FunFam	Peroxisomal biogenesis factor 6	243	380	-	-
	Mepo5g01132	380	SMART	AAA_5	281	380	IPR003593	GO:0016887
	Mepo5g01132	380	Gene3D	-	243	380	IPR027417	-
	Mepo5g01132	380	Gene3D	-	2	140	IPR027417	-
	Mepo5g01132	380	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	241	380	IPR027417	-
	Mepo5g01132	380	MobiDBLite	consensus disorder prediction	188	217	-	-
	Mepo5g01132	380	PANTHER	AAA-FAMILY ATPASE	6	380	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo5g01132	Mepo-Chr5	11448265	11451306	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo5g01132	217	380	Calmodulin-binding Proteins	AT3G56690	49.697	7.33e-45	164

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo5g01132	K13339		-	gmx:100820183	584.719