Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01113 ATGGTTAAAGTTTGGCTATTGGCTATAATGATTCTCTACAATGGCTTCTCTTCAACTGTGGCTGGCATTCATAATTCAACAAGGCCTGATATTGTAAATATTGGAGCTCTCTTTTCTTTCAATACCAGTGTTGGTAAGATTATAAAAATTGCTTTAGAAGCTGCGGTCAACGATGTAAATTCGGATCCAAATATTCTGGGCAAGACCAAGTTAAAGCTCTCTCTTCAAGAAGATTCTAAATATAGAGGTTTTCTAAGCATTGCTGAGGTTTTGCAGGTCATGGCTAGACACAATGTGGCAATAATTGGTCCTCATAGTTCTGTAACAGCTCATGTCATAACTCATATTGCAAATGAGCTTCAAGTTCCTCTTATCTCATTTTCAGCTTTAGACCCTACCCTTTCTTCACTTCAATTCCCATTCTTTATCAGAACTTGTCACAGTGATCTTTATCAAATGGCTGCAATAGCGGACCTTGTTGACTACTATGGATGGAAAGAAGTCATTGCTGTATACATTGATGATGATAATGGAAGGAACGGAATTGGTGCATTAGGCGATAAGCTTGCTGAGAAGCGTTGCAGGATCTCATATAAAGCGCCTGTGAAACCCGAAGCAACTGCAGAGGAGATAACAAATGTGCTAGTTCAGGTGGCTCTTGCTGAATCAAGAGTTATTGTAGTTCACGCAAACACTATTGGGGGCCCGAAAGTGTTTAGTGTCGCGAAGAATCTTGGAATGATGGGAACTGGTTATGTATGGATAGCCACTGCTTTTCTTTCTGCTATTCTTGATATAGATAGTCCATTGTCTTCTGATAAAATGGATGAAATCCAAGGAGTGTTGACAGCACGCGTGCACACGCCAGATTCGGAGCTTAAAAGAAAGTTTGTTTCTAAATGGAAAAACTTGACTCACGGAAATACTGATAATGGCCCTCTTGGACTTAGTTTTTTGTCTCTCTATGCATATGATACTATTTATGCTCTTGCTCATGCACTTGATGCATTTTTTAAACAAGGGAACCAAATCACATTCTCAAATGATTCAAAGTTATCTACTCTACGTGGAGACAACTTGCGTCTTGATGCATTGAACATATTCGATGGAGGAAACACATTGCGTAGGAACATTTATGAAGTTAACATGACAGGTGTGACAGGCTTGTTCAAGTATGCACCTGATAAAAATCTTGTTAATCCTACATATGAAATCATCAATGTGGTTGGAACCGGGTCTCGGAGGATCGGTTATTGGTCTAATTACTCTGGATTATCATCCATTCCTCCAGAAACACTTAATTCCAAACCAGGCAATAACCTCAGGGAGAGTAAAAGGCTATTCCCTGTGATTTGGCCTGGAAACACAGCTCAGAAGCCTCGCGGTTGGGTTTTTCCGAACAATGGAAGGCTATTAAGAATTGGAGTACCAATAGGCGTTAGTTACCGCCAATTTGTCTCGCAAGTACCAGGCACCGATACATTTCAAGGATTCTGCATTGATGTATTTCTTTCTGCAGTTAACCTATTGCCTTATGCTGTCCCTTATAAGTTTATTCCATATGGGGATGGTATGAACAATCCTAGTAACACCGAGCTTGTCCGTCTGATAACAACTGGTGAATTTGATGGTGCAGTAGGTGACATTGCAATTACTACAACAAGAACAAAAATGGTGGATTTTACTCAGCCATATATTGAGTCTGGTTTAGTGGTAGTAGCACCTGTTAGGGAGACAGAAAGTAGTGCTTTGGCCTTTTTGGCTCCATTTACACCAAGGATGTGGTTTGTCACAGCTCTCTTTTTCATAATAATTGGAACTGTTGTTTGGATTTTGGAGCATAGGGTGAATGATGAATTTAGAGGACCACCTAAAAAACAAATGGTTACTATTTTTTGGTTTAGCTTTTCAACGATGTTCTTTTCACATAGGGAAAATACAGTGAGCACATTTGGTCGTTGTGTGCTGCTTATATGGTTATTTGTAGTTCTTATAATTACTTCAAGTTACACAGCAAGTCTAACATCAATCCTCACAGTTCAACAGCTTTCTTCCCCCATCAAAGGCATTGAAAGCTTAGTAATTGGTAAAGAACCAATTGGTTACACTCAAGGTTCTTTTTCTAAAAATTATTTAATCCAAGAAATTGGTATTGATGAGTCTAGGCTTGTTGCTTTAAAAACACCTGAAGAAGCTGCTAGAGCACTTGAGAAGGGTCCTCAAAATGGCGGTGTTGCTGCTTATATCGATCAACGTGCATATATCGACATTTTCCTTGCAAGCCGGTGTAAATTTACTATTGTAGGTCAAGAGTTCACCAGAAACGGCTGGGGATTTGGTTTTCCAAGAGACTCACCATTAGCAATTGACCTATCAACTGCCATTTTGCAAATGGTAGACAATGGGGACTTGCAAAGGATTCATGACAAATGGCTTTTGAGTAGAGCTTGTTTAACACAAGGTGCAAAGCTTGAAGTTCAAAGACTCAAACTAAAAAGCTTTTGGGGACTGTATGTGATCTGTGGATCAGCATGTTTGGTTGCTCTACTAATATACTTCATACGGATAATTAGACAGTACATCAAGCACCGCTCAGAGGAACTTGATTCTCCTGACCAAAACCCTAGCTCCGGATCATCAAGTTTGAAAAAATTCATGTCCTTTGCAGATGAAAAAGAAGAGACTGTTAAGAACCGGTCAAAGAGAAAGAAAATGGAGAGAATCTCTTATAGAGGTAGTGAGGGAGGATCATCCTCCATCATCTCCAATAAAGATTATGATGCTCAGCCATCTCGACGCATAGCTGATTCTGTTCCTAATGGTAGAAGTGAACAAGTATTTGTCAAAGTGGTGTAA 2856 0.396 MVKVWLLAIMILYNGFSSTVAGIHNSTRPDIVNIGALFSFNTSVGKIIKIALEAAVNDVNSDPNILGKTKLKLSLQEDSKYRGFLSIAEVLQVMARHNVAIIGPHSSVTAHVITHIANELQVPLISFSALDPTLSSLQFPFFIRTCHSDLYQMAAIADLVDYYGWKEVIAVYIDDDNGRNGIGALGDKLAEKRCRISYKAPVKPEATAEEITNVLVQVALAESRVIVVHANTIGGPKVFSVAKNLGMMGTGYVWIATAFLSAILDIDSPLSSDKMDEIQGVLTARVHTPDSELKRKFVSKWKNLTHGNTDNGPLGLSFLSLYAYDTIYALAHALDAFFKQGNQITFSNDSKLSTLRGDNLRLDALNIFDGGNTLRRNIYEVNMTGVTGLFKYAPDKNLVNPTYEIINVVGTGSRRIGYWSNYSGLSSIPPETLNSKPGNNLRESKRLFPVIWPGNTAQKPRGWVFPNNGRLLRIGVPIGVSYRQFVSQVPGTDTFQGFCIDVFLSAVNLLPYAVPYKFIPYGDGMNNPSNTELVRLITTGEFDGAVGDIAITTTRTKMVDFTQPYIESGLVVVAPVRETESSALAFLAPFTPRMWFVTALFFIIIGTVVWILEHRVNDEFRGPPKKQMVTIFWFSFSTMFFSHRENTVSTFGRCVLLIWLFVVLIITSSYTASLTSILTVQQLSSPIKGIESLVIGKEPIGYTQGSFSKNYLIQEIGIDESRLVALKTPEEAARALEKGPQNGGVAAYIDQRAYIDIFLASRCKFTIVGQEFTRNGWGFGFPRDSPLAIDLSTAILQMVDNGDLQRIHDKWLLSRACLTQGAKLEVQRLKLKSFWGLYVICGSACLVALLIYFIRIIRQYIKHRSEELDSPDQNPSSGSSSLKKFMSFADEKEETVKNRSKRKKMERISYRGSEGGSSSIISNKDYDAQPSRRIADSVPNGRSEQVFVKVV 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01113 951 Gene3D - 759 819 - -
Mepo5g01113 951 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Mepo5g01113 951 FunFam Glutamate receptor 583 713 - -
Mepo5g01113 951 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
Mepo5g01113 951 CDD PBP1_GABAb_receptor_plant 33 426 IPR044440 -
Mepo5g01113 951 Gene3D - 50 400 - -
Mepo5g01113 951 FunFam Glutamate receptor 709 816 - -
Mepo5g01113 951 Pfam Ligand-gated ion channel 813 844 IPR001320 GO:0015276|GO:0016020
Mepo5g01113 951 FunFam Glutamate receptor 148 305 - -
Mepo5g01113 951 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Mepo5g01113 951 CDD GluR_Plant 472 812 - -
Mepo5g01113 951 MobiDBLite consensus disorder prediction 889 942 - -
Mepo5g01113 951 Pfam Bacterial extracellular solute-binding proteins, family 3 484 812 IPR001638 -
Mepo5g01113 951 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Mepo5g01113 951 MobiDBLite consensus disorder prediction 912 926 - -
Mepo5g01113 951 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 883 IPR015683 -
Mepo5g01113 951 Gene3D - 467 583 - -
Mepo5g01113 951 FunFam Glutamate receptor 467 583 - -
Mepo5g01113 951 Gene3D - 584 709 - -
Mepo5g01113 951 Gene3D - 148 425 - -
Mepo5g01113 951 PIRSF IGluLR_plant 1 945 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01113 Mepo-Chr5 11137633 11142271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01113 5 913 Ion Channels AT3G51480 57.473 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01113 K05387 - gmx:100785258 1486.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01113 5 11137633 11142271 Mepo5g01113 5 11137633 11142271 ECH
Mepo1g02252 1 23153930 23158457 Mepo5g01113 5 11137633 11142271 ECH
Mepo5g01113 5 11137633 11142271 Mepo1g02252 1 23153930 23158457 PCT