Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01112 ATGGAAGATCAAAATGATGATACTTTGGGGAGTTTGAATCAAAATGTTGTTGGGAAACCTCCAAGGGATCATTCTGCCACTATGCGTCATTGCAGCAGCTCTTCATGGCTCGTTGATTCGGAATCAAATCTTAATACCATTGTTGGCCTTAAAACAAATACAGACGATAAATCAGAGTTTCCACTTATATTGAGATCTGGAAGCTGTTCTGAGAAAGGACCAAAGCAATACATGGAGGATGAATTTACATGTATTGATATTCTTAGTGAATTTGTTGCACAACAACTAGACCTTCCATCTCCATCAGCATTTTATGGGGTATTTGATGGACATGGTGGTGTTGATGCAGCATCATTTATCAAAAAGAACATGCTTAAGTTTATAACTGAAGATTCTCAATTCCCATCTAGCATTAAAAAAGCAGTTAAGAGTGCATTTGTGAAGGCTGATCATGCATTTAGAGATGCAAGCTCTCTTGATAGCTCTTCAGGAACCACTGCTCTAATAGCCCTTGTCTTGGGAAGGTCCATGCTGATTGCAAACGCCGGAGATTCGCGCGCGGTATTAGGCAAACGAGGCAGAGCAGTTGAACTTTCAAAAGACCATAAACCAAATTGCACATCTGAAAAACTAAGAATTGAAAAACTAGGTGGAGTTATCTATGATGGATACCTAAATGGTCAACTATCAGTGGCACGTGCACTAGGAGATTGGCACATAAAAGGTACAAAAGGTTCAAAAAGTCCCTTAAGTTGTGAGCCAGAGTTAGAGGAAATTGTCCTAACAGAAGAAGATGAGTTTTTGATATTAGGGTGTGATGGATTATGGGATGTTATGAGTAGTCAATGTGCTGTTACAATGGTTAGGAGGGAACTTGTGCAACATAATGATCCTAATATATGTGCTAAGGTACTTGTTACTGAGGCACTTCAAAGAAACACTTGTGATAATTTAACTGTTGTTGTGATTTGTTTCTCTAAAGATCCACCACCTAAAATTGAAATTCCTAGATCACATAGGAGAAGGAGTATTTCAGCTGAAGGTCTTGATCTTCTCAAAGGTGTGTTGAATGGTAGATGA 1080 0.388 MEDQNDDTLGSLNQNVVGKPPRDHSATMRHCSSSSWLVDSESNLNTIVGLKTNTDDKSEFPLILRSGSCSEKGPKQYMEDEFTCIDILSEFVAQQLDLPSPSAFYGVFDGHGGVDAASFIKKNMLKFITEDSQFPSSIKKAVKSAFVKADHAFRDASSLDSSSGTTALIALVLGRSMLIANAGDSRAVLGKRGRAVELSKDHKPNCTSEKLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTKGSKSPLSCEPELEEIVLTEEDEFLILGCDGLWDVMSSQCAVTMVRRELVQHNDPNICAKVLVTEALQRNTCDNLTVVVICFSKDPPPKIEIPRSHRRRSISAEGLDLLKGVLNGR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01112 359 ProSiteProfiles PPM-type phosphatase domain profile. 65 325 IPR001932 -
Mepo5g01112 359 ProSitePatterns PPM-type phosphatase domain signature. 104 112 IPR000222 GO:0043169
Mepo5g01112 359 PANTHER PROTEIN PHOSPHATASE 2C 49 323 IPR015655 GO:0004722|GO:0006470
Mepo5g01112 359 SMART PP2C_SIG_2 80 325 IPR001932 -
Mepo5g01112 359 SMART PP2C_4 55 323 IPR001932 -
Mepo5g01112 359 Pfam Protein phosphatase 2C 66 317 IPR001932 -
Mepo5g01112 359 SUPERFAMILY PP2C-like 59 326 IPR036457 -
Mepo5g01112 359 Gene3D - 48 329 IPR036457 -
Mepo5g01112 359 MobiDBLite consensus disorder prediction 1 28 - -
Mepo5g01112 359 CDD PP2Cc 65 325 IPR001932 -
Mepo5g01112 359 FunFam Probable protein phosphatase 2C 22 50 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01112 Mepo-Chr5 11131896 11133806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01112 49 357 PP2C-type Phosphatase Gene Family AT3G51470 76.699 3.39e-178 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01112 K14803 - gmx:100786416 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01112 5 11131896 11133806 Mepo5g01112 5 11131896 11133806 ECH