Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01108 ATGTCTTGTTCTTCTTCATCAGGATCGGAGGAAGATGATGAGGGCTTTGAGTCCTATCGGAAAGGTGGATACCATGCTGTTAGAGTCGCTGATCAATTCGCTGGTGGGAGGTATATTGCTCAGAGGAAACTTGGTTGGGGTCAATTTTCTACCGTTTGGCTTGCTTATGATACTACAACCTCTTCATATGTTGCTCTCAAAATCCAGAAAAGTGCGGCCGAGTTTGTTCAGGCCGCCCTTCATGAGATCAACGTTCTTTCATCCATTGCTGATGGGGACCCATCAAATTCAAAGTTTGTTGTCCAATTGATTGATAACTTTAAGCACACAGGTCCAAATGGGCAGCACCATTGCATGGTCCTTGAGTTTCTTGGCGATAGCTTGCTTCGTTTGATCAAATATAGCCATTACAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGTAAACACATTTTGATTGGTTTGGATTACTTGCATAGTGAACTTGGTATAATCCACACGGACTTAAAGCCTGAAAACATTCTTCTATTTTCAACTATTGATCCTTCCAAAGACCCTTTTAGATCCGGACTCTCCCCAACTTTAGAACGGACTGAGGGAAACACAAACGGTGGACTTACAAGTCTTATTGAGAAAAGGCTGAAGAGAAGAGCAAAGCGTGCAGTTGCTAAAATATCGGGAAGAACAGCTTCAATTGAAGGAAGAGGAGAAGCTGCAAAGTCTAGTAGAAATATCAACGGGATTGATGTGAGATGCAAGATTGTCGATTTTGGAAATGCGTGTTGGGCTGATAACAAGTTTGCAGAAGAAATACAGACAAGACAATATAGAGCCCCTGAAGTTATACTGAAGTCTGGTTATTCCTTCTCTGTAGACATGTGGTCTTTTGCTTGCATTGCTTTCGAGCTTGCCACTGGAGATATGTTATTTACACCCAAAGGTGGTGGACAAGGTTATAGCGAGGACGAGGATCATCTTGCCTTGATGATGGAACTCCTCGGAAAGATGCCCCGGAAGATTGCTATTGGTGGAGCTCAATCCAAGGATTACTTTGACCGGCATGGTGATCTAAAAAGGATTCGAAGGCTAAAATTTTGTCCACTTGACAAATTGCTGATTGATAGATATAAATTTTCAGAGAATGATGCTCAAGAGTTTTCAGAATTTCTTTTGCCACTTTTTGATTTTGCCCCAGAAAAACGACCAACTGCACGACAATACCTGCAAAACCCCTGGCTGAACTGCAATGAATCAGTGCCAAATGAAATGAGAAATGAATCTACTGTTGAAAAGGTTAATGTTGGTATGAGCAACCTTCAAATCAAGGTAGGAAAGTGA 1341 0.4146 MSCSSSSGSEEDDEGFESYRKGGYHAVRVADQFAGGRYIAQRKLGWGQFSTVWLAYDTTTSSYVALKIQKSAAEFVQAALHEINVLSSIADGDPSNSKFVVQLIDNFKHTGPNGQHHCMVLEFLGDSLLRLIKYSHYKGLPLNKVREICKHILIGLDYLHSELGIIHTDLKPENILLFSTIDPSKDPFRSGLSPTLERTEGNTNGGLTSLIEKRLKRRAKRAVAKISGRTASIEGRGEAAKSSRNINGIDVRCKIVDFGNACWADNKFAEEIQTRQYRAPEVILKSGYSFSVDMWSFACIAFELATGDMLFTPKGGGQGYSEDEDHLALMMELLGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFCPLDKLLIDRYKFSENDAQEFSEFLLPLFDFAPEKRPTARQYLQNPWLNCNESVPNEMRNESTVEKVNVGMSNLQIKVGK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01108 446 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Mepo5g01108 446 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 224 - -
Mepo5g01108 446 Pfam Protein kinase domain 252 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01108 446 Pfam Protein kinase domain 39 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01108 446 SMART serkin_6 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01108 446 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Mepo5g01108 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Mepo5g01108 446 Gene3D Transferase(Phosphotransferase) domain 1 92 414 - -
Mepo5g01108 446 FunFam Serine/threonine-protein kinase SRPK 115 414 - -
Mepo5g01108 446 CDD STKc_SRPK 27 414 - -
Mepo5g01108 446 FunFam Protein kinase superfamily protein 24 123 - -
Mepo5g01108 446 ProSiteProfiles Protein kinase domain profile. 38 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01108 446 SUPERFAMILY Protein kinase-like (PK-like) 32 418 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01108 Mepo-Chr5 11105231 11109189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01108 4 429 EF-hand Containing Proteins AT5G22840 50.104 2.09e-165 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Mepo5g01108 Pkinase 5.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01108 K08832 - gmx:100784192 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01108 5 11105231 11109189 Mepo5g01108 5 11105231 11109189 ECH
Mepo5g01108 5 11105231 11109189 Mepo1g02247 1 23095557 23099781 PCT