Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01101 ATGCCGAAAGCTGTTTCCGATGCTAAACCTGCTGATAACCGGTTGAAGCGCAAGGGCGCTGGTACTGGAACTAAGCAATCGAAGAAAGCGAAGGATCCTAACAAGCCTAAGAGGCCTCCAAGTGCTTTCTTCGTTTTCATGTCTGAGTTCAGAGAGAGGTTTAAGAAGGAGAATCCAAGCAACAAGTCCGTTGCTGTGGTTGGGAAAGCTGGTGGAAAGGAATGGAAAGCTCTGTCTGATGCTGATAAGGCTCCATTCATTGCTAAGGCTGATAAGTTGAAGGAGGAGTATGAGAAGACAATGCGTGCTTACAATATGGGAATTACTGAGAAGAATGCTTCTGAGGAAGAAGGATCCGAGAAGTCCAAGTCTGAAGTGAATGATGATGATGAGGATGGTGATGATGAGGAAGATGAGGAGTAA 423 0.4563 MPKAVSDAKPADNRLKRKGAGTGTKQSKKAKDPNKPKRPPSAFFVFMSEFRERFKKENPSNKSVAVVGKAGGKEWKALSDADKAPFIAKADKLKEEYEKTMRAYNMGITEKNASEEEGSEKSKSEVNDDDEDGDDEEDEE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01101 140 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 36 105 IPR009071 -
Mepo5g01101 140 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 7 138 IPR031061 -
Mepo5g01101 140 MobiDBLite consensus disorder prediction 1 42 - -
Mepo5g01101 140 SMART hmgende2 35 106 IPR009071 -
Mepo5g01101 140 SUPERFAMILY HMG-box 22 106 IPR036910 -
Mepo5g01101 140 Pfam HMG (high mobility group) box 36 105 IPR009071 -
Mepo5g01101 140 Gene3D High mobility group box domain 21 125 IPR036910 -
Mepo5g01101 140 MobiDBLite consensus disorder prediction 107 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01101 Mepo-Chr5 11042582 11044053 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mepo5g01101 HMG_box 6.2e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01101 K25507 - gmx:100499992 189.504