Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01094 ATGGATTCCTCGCTCATTACCCTTCTTCTCTTCAACAACACCATTCAACCAGAGTTGATGAGAAGCGTGCATGTGTACCGTGAATGTGATGGAGGAGAAAAGGAAGTTGAAAGGGAGTTTGTGTTTTCTGAGAATGGTTCTTATGTTGAAATGAAAGCTACTCCAATTCTTAGATTGTTGAAATCTTTTGTTTGTGAAGAGATTTTTGAAGGGTATAAGAATGGAGTTTGGCTTTGTGTTTTTGCTTTTCATGCTTGTAATGTCCCTCAATTTTCTCACATTCCAACCTTTTTGTTGGTTACAAGGAATCCAAAGCTTCAGGCTATTCCAAACTTGCTTAATGATCTCCACATGATATACAAGTTGGAACCGAAGAAGGAACGAAAAGATACACCAGAGAGCTCTGCAAGGGAAGAATTGGAAGGAAACAACAATGATTTCCATCCGCCAAAAAAAGTCTTGCCTGTGCTTAATCAGGATCTCAATTGTCTTCCTTTTGAAGAAGACGAGTCTGAGTTACTGGATGATGAGACAGATTTTGAAAGTTCAGCAGGTTTTGAAAGTTCACCAGGTTTTATAGGAAAGAAAAAGAGGGCAGCCAGTGACCATGTTGCAAAGATTACTTTATCAGATTTGGCCAAGTACTTTGATATGCCAATTGCAGAAGCATCAAAGAATCTAAATGTTGGGCTTACTGTTCTCAAAAGGAAGTGCAGAGAATTTGGTATTCCTCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTCATGATCTTCAGGAAGAGGCAAAACATCAGGAAAGGGAGGATAAAGATGCAGCCATGGCAGTGATAAGAAGGCAAAAGATGTTGGAAAGTGAAAAGGAAAACATAGAGAAGAGGCCCTTCATGGACATACAGATTGAAACCAAGAGATTCAGGCAAGATGTTTTCAAGAGAAGGCACAGAGCTAGAGTTATTGAAAAACAGAATTCTACAGTTGCAAGCACCTAA 999 0.3954 MDSSLITLLLFNNTIQPELMRSVHVYRECDGGEKEVEREFVFSENGSYVEMKATPILRLLKSFVCEEIFEGYKNGVWLCVFAFHACNVPQFSHIPTFLLVTRNPKLQAIPNLLNDLHMIYKLEPKKERKDTPESSAREELEGNNNDFHPPKKVLPVLNQDLNCLPFEEDESELLDDETDFESSAGFESSPGFIGKKKRAASDHVAKITLSDLAKYFDMPIAEASKNLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHDLQEEAKHQEREDKDAAMAVIRRQKMLESEKENIEKRPFMDIQIETKRFRQDVFKRRHRARVIEKQNSTVAST 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01094 332 Coils Coil 251 271 - -
Mepo5g01094 332 MobiDBLite consensus disorder prediction 124 146 - -
Mepo5g01094 332 Pfam RWP-RK domain 206 254 IPR003035 -
Mepo5g01094 332 MobiDBLite consensus disorder prediction 124 152 - -
Mepo5g01094 332 ProSiteProfiles RWP-RK domain profile. 189 274 IPR003035 -
Mepo5g01094 332 PANTHER PROTEIN RKD4 22 320 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01094 Mepo-Chr5 10978272 10981700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01094 15 332 AtRKD Transcription Factor Family AT4G35590 50.000 6.93e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mepo5g01094 RWP-RK 2.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01094 - - gmx:100306328 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01094 5 10978272 10981700 Mepo5g01094 5 10978272 10981700 ECH