Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01083 ATGGGTCTATGCTTCACTTCACTCTCTCACCGATCACCACCCTCTTCCCTCAATATTCATAACACTTCAGGGTTTGGGAGTAATAATGATGATAGTACAAAGGAAGAGTCATCATCATGTAATAAGAGTAAAGTTTGGGAGATTGGAAATAGTGAAAGTGATAGTAAAGGAGATGAAAGCATAGAGATAAGTGGGAAGTTTCTAGAAATGCCAAATTTGAAGGTGTTTAGTTATGGAGATTTGAAGGCTGCAACAAAGAGTTTCAAGTCAGATGCATTACTTGGTGAAGGTGGTTTTGGTAAAGTGTATAAAGGTTGGTTAAATGCTGTGACACTGGCACCTGCAAAAGCTGGTTCTGGAATGATAGTGGCTATCAAAAAATTGAAACGTGATAGTCTTCAAGGTCTTCAAGAATGGCAGTCAGAAATCAATTTTTTAGGAAGGATTTCTCACCCCAACTTGGTGAAGCTACTAGGTTACTGTAGGGACAACGATGAATTTCTTCTTGTGTACGAGTTCATGCCAAGGGGAAGCTTAGAGAATCATCTCTTTAGAAGAAATACTAACATAGAGCCACTTTCTTGGAACACTCGACTCAAAATAGCTACCGATGCAGCTCGAGGCTTAGCTTTCTTGCACTCCTCAGATAAGCAAGTCATATATAGAGATTTCAAGGCTTCCAATATACTTCTTGATGGGAATTACAATGCAAAGATTTCAGATTTTGGGTTGGCTAAATTTGGACCATCTGGGGGAGATTCACATGTGACTACTAGGATCATGGGCACATATGGTTATGCTGCCCCAGAATACATGGCAACAGGTCATTTATATGTGAAGAGTGATGTTTATGGATTTGGCGTAGTGCTGCTTGAAATGTTGACAGGATTGCAAGCATTTGATTCAAAGAGGCCTGAAGGGCAGCAAAACCTAATTGAATGGATCAAGCCATCTCTCTCTGATAAAAGAAAATTGAAAAGTAACAACATTGTTGATTACAGGTTAGAGGGTCAATATACATCAAAGGCAGCATTCGAAACAGCACACCTTATTCTTAAATGCCTTCAACCTGACCCTAAAAAACGTCCTTCAATGAATGATGTTTTAGGGATATTGGAAGGCATAAAAGCTATCAAACATAAAAGGAAGATATCCAAGAATCATTGTACTAAGTCTGCAACTGTGGATAATTTATAA 1197 0.3876 MGLCFTSLSHRSPPSSLNIHNTSGFGSNNDDSTKEESSSCNKSKVWEIGNSESDSKGDESIEISGKFLEMPNLKVFSYGDLKAATKSFKSDALLGEGGFGKVYKGWLNAVTLAPAKAGSGMIVAIKKLKRDSLQGLQEWQSEINFLGRISHPNLVKLLGYCRDNDEFLLVYEFMPRGSLENHLFRRNTNIEPLSWNTRLKIATDAARGLAFLHSSDKQVIYRDFKASNILLDGNYNAKISDFGLAKFGPSGGDSHVTTRIMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLQAFDSKRPEGQQNLIEWIKPSLSDKRKLKSNNIVDYRLEGQYTSKAAFETAHLILKCLQPDPKKRPSMNDVLGILEGIKAIKHKRKISKNHCTKSATVDNL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01083 398 ProSiteProfiles Protein kinase domain profile. 88 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01083 398 MobiDBLite consensus disorder prediction 1 58 - -
Mepo5g01083 398 SUPERFAMILY Protein kinase-like (PK-like) 67 377 IPR011009 -
Mepo5g01083 398 Gene3D Phosphorylase Kinase; domain 1 72 173 - -
Mepo5g01083 398 Gene3D Transferase(Phosphotransferase) domain 1 174 396 - -
Mepo5g01083 398 ProSitePatterns Protein kinases ATP-binding region signature. 94 127 IPR017441 GO:0005524
Mepo5g01083 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Mepo5g01083 398 CDD STKc_IRAK 94 375 - -
Mepo5g01083 398 FunFam Serine/threonine-protein kinase BIK1 55 173 - -
Mepo5g01083 398 PANTHER OS01G0588500 PROTEIN-RELATED 43 375 - -
Mepo5g01083 398 MobiDBLite consensus disorder prediction 1 34 - -
Mepo5g01083 398 FunFam Serine/threonine-protein kinase PBS1 174 391 - -
Mepo5g01083 398 Pfam Protein kinase domain 89 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01083 Mepo-Chr5 10825637 10828943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01083 4 372 Glycoside Hydrolase AT3G07070 42.819 1.94e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo5g01083 Pkinase 5.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01083 - - gmx:100794193 517.694