Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01075 ATGAAGTTTTCTCAGGAAAAGAATGTTTCTAACAACAACCCCACAAATTTTGAAGGAGGGTTAGATTCTAGAAAGGTTGTGCAAAACAGAAGGGCATTGGGTGTGATTAATCAGAATTTGGTTGTGGAAGGACGTCCTTATCCTTGTGTTGTTAACAAGAGGGCATTGTCAGAGAGAAATGATGTTTGTGAGAAGATACAAGCGGATCCGGTTCATCGACCCATCACTAGGAGGTTTGCTGCAAAGATTGCTAGCACAAAAACAACTAATGCTGAGGGAACTACCAAAAAGTCAAACTTGGCAAATTCAAGTTCAAATGGATTTGGAGATTTCATATTTGTTGATGATGAACACAAGCCAGTGGAGGATCAGCCAGTGCCAATGGCTTTAGAGCAGACAGAACAAATGCATAGCGAATCGGATCGGATGGAGGAAGTTGAGATGGAGGATATCATGGAAGAGCCTGTTATGGACATTGACACCCCTGATGCAAATGACCCTCTTGCAGTTGCTGAATATATTGAAGATCTTTATTCTTACTACAGAAAAGTTGAGAGTACTAGCTGTGTTTCACCAAACTATATGGCACAGCAATTTGACATTAATGAAAGGATGAGGGCTATACTGGTTGACTGGCTTATTGAGGTGCATGACAAATTCGACCTCATGCATGAGACATTGTTTCTCACTGTCAATCTTATAGACAGATTTTTGGAAAAACAGTCTGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTGGCAATGCTTTTGGCATGCAAGTATGAGGAAGTTTCAGTGCCTGTGGTTGGAGATCTAATTCTTATATCAGACAGAGCATACACCCGGAAAGAAGTTCTGGAAATGGAGAAGGTGATGGTCAATGCATTGAAGTTTAACATATCTGTGCCAACAGCCTATGTTTTCATGAGAAGGTTCTTAAAGGCAGCTCAAGCAGACAGAAAACTTGAGCTGCTAGCTTTCTTCTTGATAGAGCTATCTCTTGTAGAATATGCAATGTTGAAGTTCCCTCCTTCTCAACTAGCTGCAGCTGCTGTATATACAGCCCAATGCACTATGTATGGTGTCAAACAGTGGAGCAAGACATGTGAATGGCACACCAACTACTCTGAAGATCAACTCTTAGAGTGCTCTAGTTTAATGGTTGACTTTCACAAGAAGGCTGGGACAGGGAAACTTACAGGGGCACATAGGAAGTATTGCACATCAAAATTTAGCTATACTGCGAAATGTGAACCAGCAAGTTTTCTTCTGGAGAACGAGTTGTAG 1290 0.4132 MKFSQEKNVSNNNPTNFEGGLDSRKVVQNRRALGVINQNLVVEGRPYPCVVNKRALSERNDVCEKIQADPVHRPITRRFAAKIASTKTTNAEGTTKKSNLANSSSNGFGDFIFVDDEHKPVEDQPVPMALEQTEQMHSESDRMEEVEMEDIMEEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTSCVSPNYMAQQFDINERMRAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVLEMEKVMVNALKFNISVPTAYVFMRRFLKAAQADRKLELLAFFLIELSLVEYAMLKFPPSQLAAAAVYTAQCTMYGVKQWSKTCEWHTNYSEDQLLECSSLMVDFHKKAGTGKLTGAHRKYCTSKFSYTAKCEPASFLLENEL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01075 429 CDD CYCLIN_AtCycB-like_rpt1 153 299 - -
Mepo5g01075 429 Gene3D - 190 302 - -
Mepo5g01075 429 MobiDBLite consensus disorder prediction 1 22 - -
Mepo5g01075 429 Gene3D - 176 416 - -
Mepo5g01075 429 Pfam Cyclin, C-terminal domain 304 419 IPR004367 -
Mepo5g01075 429 ProSitePatterns Cyclins signature. 206 237 IPR006671 -
Mepo5g01075 429 MobiDBLite consensus disorder prediction 1 19 - -
Mepo5g01075 429 PIRSF Cyclin_A_B_D_E 2 429 IPR046965 GO:0016538|GO:0044772
Mepo5g01075 429 PANTHER CYCLINS 135 394 IPR039361 -
Mepo5g01075 429 Pfam Cyclin, N-terminal domain 176 302 IPR006671 -
Mepo5g01075 429 SMART Cyclin_C_2 304 421 IPR004367 -
Mepo5g01075 429 SMART cyclin_7 211 295 IPR013763 -
Mepo5g01075 429 SMART cyclin_7 308 390 IPR013763 -
Mepo5g01075 429 SUPERFAMILY Cyclin-like 303 421 IPR036915 -
Mepo5g01075 429 CDD CYCLIN_AtCycB-like_rpt2 304 420 - -
Mepo5g01075 429 SUPERFAMILY Cyclin-like 165 301 IPR036915 -
Mepo5g01075 429 FunFam G2/mitotic-specific cyclin-1 291 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01075 Mepo-Chr5 10676314 10680199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01075 30 425 Core Cell Cycle Gene Families AT1G20610 59.900 1.34e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g01075 K21777 - gmx:100798068 688.723