Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g01061 ATGGTGATCGAGAACGACATTGAGAGTTGCGGAAGCAGAGCGGTGCAATCACACGCCAATCCTCGCCATCACCGTCAGAAACTTGAAGTATACAATGAAGTTCTTCGTCGAATTCAAGATTCCGATTGCGAAGACGCTCTTGTTCCTGGTTTTGATGATCAACTCTGGCTTCACTTCAATCGTCTTCCCGCTAGGTATGCATTGGATGTGAATGTGGAGAGAGCAGAAGATGTTCTTGCTCACAAGAGATTGCTCGAGTTGGCTGAAGATCCCGCGAATCGTCCTGCATTTCAAGTTCGTTTAGTACAGGTATATCCTTTTGCTGGTGCAAATCATAACGATTCTTCAGTGCATTCAGATCCTTCTGAGAAAGATGATGCACAAAGTTCTCTTAACTATTCTTTAAAGCAGGGAATTCATCCACCACCTACGTTTGGTTCTTCCTCTAACCTAGAAGCTCTTGCACTTCATACAAATAAAAATAACATTGAAGATGGAGACAATACTATGGGTGTGACGCCAAATTTTAACAGGCCCATGCACGAGATTACCTTTTCAACAATTGACAAGCCTAAACTCCTTAGTCAGTTAACTTCAATACTTGGTGAGATTGGACTGAATATTCAAGAAGCTCATGCGTTTTCCACCTCTGATGGGTTTTCCCTGGATGTCTTTGTCGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTTAAAGGTGTGCTCGAAAAGGAAATTTTGAAGGTTAAGGATCAATATCTGTCAAATCAGGGCACAGTTTATTCCTCAAATGATCAATACCAGACTAGGATGGAATCCTCCCCTGATTGCATACAAATACCATTTGATGGAGCTGATGTCTGGGAAATTGATCCCAGCCAGCTAAAATATGAAAACAAAGTTGGATCTGGATCATTTGGTGACTTATTCAGAGGAAGTTATTGCAGTCAAGATGTGGCTATCAAAGTTCTTAAGCCTGAACGCATAAGTACAGATATGCTGAAAGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATTGGTGCTTGTACTCGGCCTCCAAATCTTTGTATTGTTACGGAGTTTATGTCGAGAGGAAGCTTATATGATTTTCTGCACAGACAAAAGGGTGTGTTTAAGCTTCCATCTTTACTAAAAGTAGCCATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATTATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGACGAAAATGAATTGGTCAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAGTCTGGAGTGATGACAGCTGAAACTGGAACATACCGCTGGATGGCTCCTGAGGTCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTCAGTTTTGGAATAGCACTCTGGGAGCTTTTAACTGGAGAGCTGCCTTACTCTTACTTGACCCCATTACAAGCAGCAGTTGGTGTGGTGCAGAAGGGTCTACGGCCTACAATTCCCAAAAATACACATCCAAGAATTTTTGAACTACTACAGCGGTGCTGGCAACAAGATCCAAAGGAGAGACCAGCCTTTTCTGAAATAATTGAAATTCTCCAACACCTAGCAAAAGAGGTTAATGATGTAGATCGACATAAAGATAAGTCATCACACGGTTTCCTCTCATCACTTAGGCGTGGCCATCACTGA 1725 0.4209 MVIENDIESCGSRAVQSHANPRHHRQKLEVYNEVLRRIQDSDCEDALVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLELAEDPANRPAFQVRLVQVYPFAGANHNDSSVHSDPSEKDDAQSSLNYSLKQGIHPPPTFGSSSNLEALALHTNKNNIEDGDNTMGVTPNFNRPMHEITFSTIDKPKLLSQLTSILGEIGLNIQEAHAFSTSDGFSLDVFVVEGWPNEETEELKGVLEKEILKVKDQYLSNQGTVYSSNDQYQTRMESSPDCIQIPFDGADVWEIDPSQLKYENKVGSGSFGDLFRGSYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHRQKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENELVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSYLTPLQAAVGVVQKGLRPTIPKNTHPRIFELLQRCWQQDPKERPAFSEIIEILQHLAKEVNDVDRHKDKSSHGFLSSLRRGHH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g01061 574 MobiDBLite consensus disorder prediction 554 574 - -
Mepo5g01061 574 SUPERFAMILY Protein kinase-like (PK-like) 271 544 IPR011009 -
Mepo5g01061 574 ProSiteProfiles ACT domain profile. 182 256 IPR002912 -
Mepo5g01061 574 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Mepo5g01061 574 Pfam Protein tyrosine and serine/threonine kinase 295 544 IPR001245 GO:0004672|GO:0006468
Mepo5g01061 574 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Mepo5g01061 574 SMART serkin_6 295 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01061 574 FunFam serine/threonine-protein kinase HT1 374 565 - -
Mepo5g01061 574 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Mepo5g01061 574 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Mepo5g01061 574 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Mepo5g01061 574 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Mepo5g01061 574 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Mepo5g01061 574 Gene3D Transferase(Phosphotransferase) domain 1 374 568 - -
Mepo5g01061 574 Coils Coil 232 252 - -
Mepo5g01061 574 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 142 550 - -
Mepo5g01061 574 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Mepo5g01061 574 CDD ACT_TyrKc 180 247 - -
Mepo5g01061 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Mepo5g01061 574 ProSiteProfiles Protein kinase domain profile. 295 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g01061 574 SUPERFAMILY ACT-like 180 244 IPR045865 -
Mepo5g01061 574 CDD STKc_MAP3K-like 301 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g01061 Mepo-Chr5 10389573 10398157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g01061 2 573 MAP Kinase Kinase Kinase AT4G35780 69.444 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mepo5g01061 PK_Tyr_Ser-Thr 3.5e-75 CL0016