Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00995 ATGCTCTCATCAATATCTCTTCCTTCTTCTCTCTACGCCGCCGGTAACTTCTCCGGCACCGCCGTAACACCACCACCGTGCCGTGTCAGATCGAAGCCAATAATCACCACAGCAAGCTCCACAGCCACCGCCGAACCTCGCTCTACATGGACTACAGAACAACAAAGACCTTCATATTTAAACATGAACTCTTTTTCTCACTCTTCTCCTGGATCGCACTATGACATCCTCGGTATATCAGCAGCTGCCTCGAACCAAGAAATCAAGGCAGCGTACCGGCGACTTGCAAGAGTCTGCCACCCTGACGTGGCGGCAATTGACCGGAAAAACTCGTCGGCGGATGATTTCATGAAAATTCACACTGCTTACTCTACACTCTCAGATCCTGATAAACGTGCTAATTATGATCGGAGTCTTTTCGTCCGGCGACAATGGCCGTTGTCGTCGTCGATAATGTCTTCTGGTTACTCAGGTCGGAAATGGGAGACCGATCAATGTTGGTAG 504 0.498 MLSSISLPSSLYAAGNFSGTAVTPPPCRVRSKPIITTASSTATAEPRSTWTTEQQRPSYLNMNSFSHSSPGSHYDILGISAAASNQEIKAAYRRLARVCHPDVAAIDRKNSSADDFMKIHTAYSTLSDPDKRANYDRSLFVRRQWPLSSSIMSSGYSGRKWETDQCW 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00995 167 PRINTS DnaJ domain signature 74 92 IPR001623 -
Mepo5g00995 167 PRINTS DnaJ domain signature 92 107 IPR001623 -
Mepo5g00995 167 PRINTS DnaJ domain signature 111 131 IPR001623 -
Mepo5g00995 167 ProSiteProfiles dnaJ domain profile. 72 139 IPR001623 -
Mepo5g00995 167 Pfam DnaJ domain 73 136 IPR001623 -
Mepo5g00995 167 Gene3D DnaJ domain 60 151 IPR036869 -
Mepo5g00995 167 SUPERFAMILY Chaperone J-domain 39 135 IPR036869 -
Mepo5g00995 167 ProSitePatterns Nt-dnaJ domain signature. 116 135 IPR018253 -
Mepo5g00995 167 CDD DnaJ 73 128 IPR001623 -
Mepo5g00995 167 SMART dnaj_3 71 131 IPR001623 -
Mepo5g00995 167 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 10 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00995 Mepo-Chr5 9797936 9798784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00995 62 136 C2H2 Transcription Factor Family AT1G74250 43.038 1.61e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00995 - - gmx:100800959 223.787