Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00994 ATGCTTTCTTCATTATCTCTTCCTTCTTCTCTCTACGCCGCCGGTAACTTCTCCGGCACCGCCGTAACACCACCACCGTGCCGCGTCAGATCGAAGCCAATAATCATCACCGCAAGTTCCACAGCCACCGCCGAACCTCGCTCTCGCTCTACATGGACAGAGCAACAAAGACCTTCGTATTTAAACATGAATTCATTTTCTCACTCTTCTCCTGGATCACACTATGAGATCCTCGGTATATCAGCAGGTGCTTCGAATCAAGAAATCAAGGCAGCCTACCGGCGACTTGCAAGAGTCTGCCACCCTGATGTGGCGGCGATTGATCGGAAAAACTCATCGGCGGATGATTTCATGAAGATTCACTCTGCATATTCGACGCTTTCGGATCCTGATAAACGTGCTAACTATGATCGGAGTCTTTTCCGGCAACAACGACGGCCGTTGTCGACGATGGTGTCTTCCGGCTACTCAAGTCGAAAATGGGAGACTGATCAGTGTTGGTAG 504 0.5 MLSSLSLPSSLYAAGNFSGTAVTPPPCRVRSKPIIITASSTATAEPRSRSTWTEQQRPSYLNMNSFSHSSPGSHYEILGISAGASNQEIKAAYRRLARVCHPDVAAIDRKNSSADDFMKIHSAYSTLSDPDKRANYDRSLFRQQRRPLSTMVSSGYSSRKWETDQCW 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00994 167 ProSiteProfiles dnaJ domain profile. 73 140 IPR001623 -
Mepo5g00994 167 CDD DnaJ 74 129 IPR001623 -
Mepo5g00994 167 Gene3D DnaJ domain 61 160 IPR036869 -
Mepo5g00994 167 Pfam DnaJ domain 74 137 IPR001623 -
Mepo5g00994 167 SUPERFAMILY Chaperone J-domain 48 136 IPR036869 -
Mepo5g00994 167 ProSitePatterns Nt-dnaJ domain signature. 117 136 IPR018253 -
Mepo5g00994 167 PRINTS DnaJ domain signature 112 132 IPR001623 -
Mepo5g00994 167 PRINTS DnaJ domain signature 75 93 IPR001623 -
Mepo5g00994 167 PRINTS DnaJ domain signature 93 108 IPR001623 -
Mepo5g00994 167 SMART dnaj_3 72 132 IPR001623 -
Mepo5g00994 167 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 9 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00994 Mepo-Chr5 9789583 9790316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00994 63 137 C2H2 Transcription Factor Family AT1G74250 44.304 1.61e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00994 - - gmx:100800959 225.713