Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00993 ATGCTCTCTTCAATATCTCTTCCTTCTTCTCTATACGCCGCCGGTAACTTCTCCGGAACCGCCGTGACACCACCGCCGTGCCGTGTCAGATCGAAGCCAATACTCATCACCGCAAGCGCTACAGCCACCGCCGAAGCTCGTTCTACATGGACAGAACAACAAAGACCTTCGTATCTTAACATGAACTGTTCTTCTCACACTTCTCCTGCATCACTTTACCAGATTCTCGGTATATCAGCAGGTGCTTCCAATCAAGAAATCAAGGCTGCGTACCGGCGACTTGCTAGAGTCTGCCATCCTGATGTTGCGGCTATTGACCGGAAAAACTCTTCGGCGGATGATTTCATGAAGATTCACTCTGCATATTCGACGCTTTCGGATCCTGATAAACGTGCTAACTATGATCGGAGTCTTTTCCGGCAACAACGGCAGCCGTTGTCGTCGATGGTGTCTTCCGGATACTCAAGTCGAAAATGGGAGACCGATCAGTGTTGGTAA 498 0.496 MLSSISLPSSLYAAGNFSGTAVTPPPCRVRSKPILITASATATAEARSTWTEQQRPSYLNMNCSSHTSPASLYQILGISAGASNQEIKAAYRRLARVCHPDVAAIDRKNSSADDFMKIHSAYSTLSDPDKRANYDRSLFRQQRQPLSSMVSSGYSSRKWETDQCW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00993 165 PRINTS DnaJ domain signature 91 106 IPR001623 -
Mepo5g00993 165 PRINTS DnaJ domain signature 110 130 IPR001623 -
Mepo5g00993 165 PRINTS DnaJ domain signature 73 91 IPR001623 -
Mepo5g00993 165 SUPERFAMILY Chaperone J-domain 69 140 IPR036869 -
Mepo5g00993 165 Pfam DnaJ domain 72 135 IPR001623 -
Mepo5g00993 165 SMART dnaj_3 70 130 IPR001623 -
Mepo5g00993 165 Gene3D DnaJ domain 58 158 IPR036869 -
Mepo5g00993 165 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 14 152 - -
Mepo5g00993 165 CDD DnaJ 73 127 IPR001623 -
Mepo5g00993 165 ProSitePatterns Nt-dnaJ domain signature. 115 134 IPR018253 -
Mepo5g00993 165 ProSiteProfiles dnaJ domain profile. 71 138 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00993 Mepo-Chr5 9768654 9769696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00993 61 135 C2H2 Transcription Factor Family AT1G74250 40.506 5.49e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00993 - - gmx:100800959 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00993 5 9768654 9769696 Mepo5g00993 5 9768654 9769696 ECH