Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00979 ATGGCTATAAAAAAATCCAACAAACTACCACAAGCTGAAGTTATCAAGCAAATTGTCAAAAGATGTTCAAGTTTTGGCAAAAGGCAGAGTTACAATGAAGAGGGTCTTCCTGTGGATGTACCAAAAGGTCATTTTGTAGTTTATGTTGGAGAGAATAGAACAAGATACATTATTCCAATTTCTTGGTTGGCACATCCTCAATTTCAAAGTTTGCTACAAAGAGCTGAAGATGAATTTGGCTTCAATCATGATATGGGACTTACTATCCCTTGTGATGAAGTTTTTTTTGAGTCCTTAACTTCAATGATGAGATAA 315 0.3492 MAIKKSNKLPQAEVIKQIVKRCSSFGKRQSYNEEGLPVDVPKGHFVVYVGENRTRYIIPISWLAHPQFQSLLQRAEDEFGFNHDMGLTIPCDEVFFESLTSMMR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00979 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Mepo5g00979 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00979 Mepo-Chr5 9586731 9587505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00979 5 103 Calmodulin-binding Proteins AT4G34750 42.000 6.28e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00979 K14488 - gmx:100798840 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02405 2 33833559 33834337 Mepo5g00979 5 9586731 9587505 ECH
Mepo5g00979 5 9586731 9587505 Mepo5g00979 5 9586731 9587505 ECH