Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00972 ATGGAATCCATGGAGTCATGTGTCCCACCAGGGTTTCGTTTCCACCCAACTGATGAAGAACTTGTTGGTTATTATCTCAGAAAGAAAATTGCTTCTCAGAAAATTGACCTTGATGTTATCAGAGAGATCGATCTTTATCGTATTGAACCATGGGATCTTCAAGAGAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTTTTCAGCCATAAAGATAAAAAGTATCCAACAGGAACAAGAACTAACAGAGCTACCATGGCTGGGTTTTGGAAAGCAACAGGAAGAGATAAAGCAGTTTATGATAAGATGAAACTAATTGGGATGAGGAAGACTCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAATCTGATTGGATCATGCATGAATATAGGCTTGAATCTGATGAAAATGGACCTCCACAGGAGGAAGGATGGGTAGTGTGTAGAGCATTTAAGAAAAGAACAACAAATAGCCAAAGTACAAAAAGTACTATTGAAGGATGGGACACAAGCTACTTCTATGAAGAAGCTGCAAGTAGGATCAACAATTCCATGGTGGATCCAATTGATCAGATAATCTCAAGGCAACCTCAAAGCTATTTATCCCAAAGTTATAACATGTGTAAGCAAGAGATAGAAGCATGCATGCATGCAGAACAATTTTTGCAGCTTCCTCAGCTTGAAAGTCCTTCATTGCCATTAGTAAAGAGGCCAAGCACAATGTCTCTAGTATCGGACAATAATAACGATGACATTAACGACCAAAACAGGTTGCTGTTATTATCGAACAACAACGATAATATTACTGCAAATACAGTTACTGATTGGAGAGCTCTTGATAAGTTTGTGGCTTCTCAACTGAGTCACGAAGTTGAAACTGATCATCAAGGAGTGTTGTTGTCAAGTTTTGGAACAAATAATAATCCTAGCTCGGACATGGCATTGATGTTACTGCAGCAGGGTAATAGAGATGAAGAGAACAAGTTAAGTCCATTTTTGAATGCAAGTTCAGATTGCAGTGATATTGGGATATGCGTATTTGAAAAATGA 1062 0.387 MESMESCVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKMKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTTNSQSTKSTIEGWDTSYFYEEAASRINNSMVDPIDQIISRQPQSYLSQSYNMCKQEIEACMHAEQFLQLPQLESPSLPLVKRPSTMSLVSDNNNDDINDQNRLLLLSNNNDNITANTVTDWRALDKFVASQLSHEVETDHQGVLLSSFGTNNNPSSDMALMLLQQGNRDEENKLSPFLNASSDCSDIGICVFEK 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00972 353 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Mepo5g00972 353 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Mepo5g00972 353 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 243 - -
Mepo5g00972 353 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Mepo5g00972 353 FunFam NAC domain-containing protein 17 161 - -
Mepo5g00972 353 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00972 Mepo-Chr5 9528412 9531612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00972 1 352 NAC Transcription Factor Family AT2G18060 62.634 9.02e-153 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo5g00972 NAM 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00972 - - aprc:113869508 520.005