Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo5g00959 | ATGGAACAATCGAAGCCGGAAACACCGGAGACAGTTCCGGCGACAGTTCCGGTGGCCGTTACGGAGACTGCGGCGGAGACGAAGCAAGTTGAAGTTCCGACGAAGGCTGTTTCCGATGTGAACATAACGGAGAGAGACGGCGGTTGTTGTACGGCGCCGAAAGTAGTTCTCGCTGTCATCGCCGAGAACAGTGAGTTTACGAAGAAGAAGCGAGGTCGTCCGGCGAAAGGAACTCCGAAAGTAGCTCCTCCGCCTAAGCAGATCAAGAAGGAAGATGAAGATGTTTGTTTCATTTGCTTCGACGGTGGAAGTCTCGTTCTCTGCGATCGCCGGGGTTGTCCTAAAGCGTATCATCCGGCGTGTGTCAAGCGAGATGAATCGTTCTTCCGTTCAAAAGCCAAATGGAATTGCGGTTGGCATATATGTAGCTCTTGTCAGAAAGCATCCCATTATATGTGCTATACTTGTACGTATTCTTTGTGCAAGGGGTGTATAAAAAATGCGGATTTTGTTTCTGTTAGAGGAAATAAAGGTTTGTGTGGAATTTGCAAGAAAACTATAATGCTGATTGAGAACAGTGCCCAGGGAAATAAGGAAATGTGTGAAGTGGATTTCGATGACAAGAGCAGCTGGGAGTATCTTTTCAAGATGTATTGGATATTTTTGAAAGAGAATATATCTTTAACGTTTGATGAGCTCCTTCGAGCTAAAAACCCATTGAGCGCTGCTGCTCCTATGGTTCAAACTTCCCACAAACTATACCATCTTAAAGACGAAAAAGGTTCTGGTTTTGAGAACTCCTCTGTAGATATAGAATCAAATAATTTGAAAAATAAGAAGCCTAAGGGACCTTCAGGTGGTGACACGGGTGTGTCTTTGCCTGAGTGCAAGAGATGGGCATCAAAGGAGCTTCTAGAGTTTGTCTTACATATGAAAAATGGTGATACGTCTATACTTTCTCAATTTGATGTCCAGAATCTCTTGCTGGAGTATGTAAAGAAAAACAATCTGCGTGACCCTCAACAGAAATCCCAAATTGTTTGCGATTCTAGACTAGTGAATTTGTTTGGAAAAGCTCGTCTTGGCTACATTGAAATGCTAATGCTCCTTGAACCCCACTTTCTTATAAAAGAAAATACACCTGCAGAAAATAATTTTGGAGCAGGAATTAGTGATGCTGTTGCGAATGGAAAGGAGGCCATTGACAGTAACAATAAACAGTCAGTGTTAGTCAATGATAAGAGATGCACAACAAGTAAAAAGGTTGACATGTCTGTGACACAAAATAATCAAGATGCATACGCGTCAATAAATGCTCACAACATTAACTTGATCTACTTGCGGCGAAGTCTGATGGAGAGTCTGACTGATGATAGTGAAAGGATTCACGAGAAGATTGTTGGTTCTTTTGTGCGGATAAGAATCTCTAGTGGTGATCAGAAACAAGATATGTATAGACTTGTCCAAGTTGTAGGTACAAGTAAGGTTGCTGAACCTTACAAAATTGGCACAAGAACGACTGACATTAAGCTTGAAATTTTAAATTTAAACCGGAAGGAGGTCATATCGATAGACGAGATTTCGAATCAGGAGTTCTCTGAGGATGAATGCAAGCGATTGCGTCAAAGTATAAAGTATGGGCTTTCAAAGAGATTGACTGTGGGAGAGATTCTGAACAAAGCGCTGACATTTCAAGAAATTAGAGTTGATGATTTATTGGAAGCTGAGAAATTGCGGCTTAATAATCTTCGTGATAGAGCAAGCGAGAAGGGACACAGAAAAGAGCTTAAAGAATGCGTAGAGAAGTTGCAGCTACTAAATTCCCCGGAGGAACGTCAGCGCAGACTGCATGAAGTTCCAGATGTACACTCTGACCCCAATTTGGATTCATTGTATGAGTCTGATGAAGATGCTGGAGAGTCAGATGGCAATAAACAAGATGGTAATATACCCATTTTCTCCAGAATTTGGGATGGTGTCTTGAATGGTGTTGGGGGAAGAACTCGGGACTTGACCACTGCCAGTGACCCAATTGAGAATACATGCTTACTAAAGAAGCATATCAACCCAAACGAAACTCCTATTAATGATAGTGCTGATGTTGTTACGAAGTCAGAAGTGTCTAGTGTTGCAGTGGACATTTCATCTCCACTTCTCTCTACAGGGATTGCGCAGCCATTTGATGATTTTATGAATGATAAGTCATGGCATTATCAGGATCCATCTGGGAAGGTTCAAGGACCTTTTTCTATGTTGCAGCTGTATAAGTGGAATGCAAGTGGACATTTCCCTCCAGATCTCAAAGTATGGAGGGTAGATGAGAAACAAGTAAACTCTATATTGTTAACTGATGCACTTAATGGGAAGTGCTCCAAAAATGTGCCATTACGGAACAACAGCCTATTGCTCTCTTTAGGAGCCAATGTTGCATTGGATGACAAAGAAAACAGTCAGGATGGTGGGAGGAATTCAACAACGAATGAAATTTCTGCAGATAGCCGAATCATCGAACAGATCAGAGAACAAAAAGTGGATGATACTTCGACCCAGTCTAATGGTAAAGATGAATCCGTGAGGAGCAATGGATGGCATGACCAGTCACATGTACACCCTTCTACACAACCAACTGCTTTTTCTGAGAATTTGAATGAGAACCACACCAACAAATTAAGGGAGGATCATGGGATTGAGAAAAACTCTGAAGATAATGGAAATCATGACTTAAACAGGACTTCTGGTGGTCAGAGTAATAGTGGTCAGAATCATCAGAAGCAATCAGATAGTGAAGACAACTCAGGGCAATCTTCGGCACAAAGCTGGAGAAACCATAATGTAAATACTTCTTCCAATTGCTTGGATACCACATCGGCCCATGTTTCTGAAACAAGAACATCACCACTTAAGCTGGGATTTGATTTGCACCAACCCCCTTCCCCTCCAGCATGCAATGCAACTACATGGCAGGCTATTATAGGTGAACCAGATGATTTTGATGAATCAGTTTCAGATCTTTTGGCAGAAGTGGAGGCAATGGAATCACTTGGTGGCTTGGAATCTCCTACTTCAATCATGAAACGTAGCGAGGAATTGACTGATGGTTCTAAAAATCTTTGTCTCAGTTTTGCAGAGCTTAGTCCAATGCTTGATGCAGGTAAAAGCGATGCATTGAGCTCCACGTGTGATTTACAGTTACTATCTCAATCTACAGCAGCAGAGGAACCGTTACAACAAGCAGATGTCAATCATCATCATCAAAGAATATCAGAGGAGCTTTCCTCGAGAAATTCTAAAGTTGACGTGGGTTCAAAGAACATATGTGTTTCAAGTAACCAGTGGGAGTCAGGCTCGGAAAATTCTTCTATTTTTCCAGCTACTGCAACATTGGGCATGACTGTAGACACCACTTGGAGACTTGGATTGGAAAGTACACACCTGGAATGGGGAGGAATGGATCAACGAAATGCAAACACGAGTTGGGGAGTAGGACATACGGCAGTGAATGAGAACAGAAGCTCAAATTCATGCACTTCTGTAGTAACTCCAAGCTTTGGGGATAGCCAGACAAGATACGGAAGTGATCGATTTTCTGTGCCCAGAGATCGGGGTTTTCCTGGTCATGGTAGGGAACCAGGTTTAGTTAGAGGCAGAGCTGCGTGGAACAGGCAACCACTATTTGGTGCTGGTAATGGAGGCTCATATAGACCTCCGCCCAAAGGGCAGCGAGTTTGTAAATTTTATGAAAGTGGGTACTGTAGGAAAGGGGCATCCTGTGAATACTTCCACCCATGA | 3789 | 0.4257 | MEQSKPETPETVPATVPVAVTETAAETKQVEVPTKAVSDVNITERDGGCCTAPKVVLAVIAENSEFTKKKRGRPAKGTPKVAPPPKQIKKEDEDVCFICFDGGSLVLCDRRGCPKAYHPACVKRDESFFRSKAKWNCGWHICSSCQKASHYMCYTCTYSLCKGCIKNADFVSVRGNKGLCGICKKTIMLIENSAQGNKEMCEVDFDDKSSWEYLFKMYWIFLKENISLTFDELLRAKNPLSAAAPMVQTSHKLYHLKDEKGSGFENSSVDIESNNLKNKKPKGPSGGDTGVSLPECKRWASKELLEFVLHMKNGDTSILSQFDVQNLLLEYVKKNNLRDPQQKSQIVCDSRLVNLFGKARLGYIEMLMLLEPHFLIKENTPAENNFGAGISDAVANGKEAIDSNNKQSVLVNDKRCTTSKKVDMSVTQNNQDAYASINAHNINLIYLRRSLMESLTDDSERIHEKIVGSFVRIRISSGDQKQDMYRLVQVVGTSKVAEPYKIGTRTTDIKLEILNLNRKEVISIDEISNQEFSEDECKRLRQSIKYGLSKRLTVGEILNKALTFQEIRVDDLLEAEKLRLNNLRDRASEKGHRKELKECVEKLQLLNSPEERQRRLHEVPDVHSDPNLDSLYESDEDAGESDGNKQDGNIPIFSRIWDGVLNGVGGRTRDLTTASDPIENTCLLKKHINPNETPINDSADVVTKSEVSSVAVDISSPLLSTGIAQPFDDFMNDKSWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLKVWRVDEKQVNSILLTDALNGKCSKNVPLRNNSLLLSLGANVALDDKENSQDGGRNSTTNEISADSRIIEQIREQKVDDTSTQSNGKDESVRSNGWHDQSHVHPSTQPTAFSENLNENHTNKLREDHGIEKNSEDNGNHDLNRTSGGQSNSGQNHQKQSDSEDNSGQSSAQSWRNHNVNTSSNCLDTTSAHVSETRTSPLKLGFDLHQPPSPPACNATTWQAIIGEPDDFDESVSDLLAEVEAMESLGGLESPTSIMKRSEELTDGSKNLCLSFAELSPMLDAGKSDALSSTCDLQLLSQSTAAEEPLQQADVNHHHQRISEELSSRNSKVDVGSKNICVSSNQWESGSENSSIFPATATLGMTVDTTWRLGLESTHLEWGGMDQRNANTSWGVGHTAVNENRSSNSCTSVVTPSFGDSQTRYGSDRFSVPRDRGFPGHGREPGLVRGRAAWNRQPLFGAGNGGSYRPPPKGQRVCKFYESGYCRKGASCEYFHP | 1262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo5g00959 | 1262 | Gene3D | - | 437 | 566 | IPR036128 | GO:0003677 | |
Mepo5g00959 | 1262 | MobiDBLite | consensus disorder prediction | 834 | 863 | - | - | |
Mepo5g00959 | 1262 | ProSiteProfiles | GYF domain profile. | 733 | 787 | IPR003169 | GO:0005515 | |
Mepo5g00959 | 1262 | MobiDBLite | consensus disorder prediction | 906 | 959 | - | - | |
Mepo5g00959 | 1262 | SMART | rtf1 | 436 | 546 | IPR004343 | GO:0003677 | |
Mepo5g00959 | 1262 | Pfam | GYF domain | 736 | 779 | IPR003169 | GO:0005515 | |
Mepo5g00959 | 1262 | ProSiteProfiles | SWIB/MDM2 domain profile. | 293 | 376 | IPR003121 | - | |
Mepo5g00959 | 1262 | ProSiteProfiles | Plus3 domain profile. | 436 | 569 | IPR004343 | GO:0003677 | |
Mepo5g00959 | 1262 | SMART | gyf_5 | 734 | 789 | IPR003169 | GO:0005515 | |
Mepo5g00959 | 1262 | FunFam | Zinc finger CCCH domain-containing protein 19 | 85 | 185 | - | - | |
Mepo5g00959 | 1262 | SUPERFAMILY | FYVE/PHD zinc finger | 90 | 140 | IPR011011 | - | |
Mepo5g00959 | 1262 | FunFam | Zinc finger CCCH domain-containing protein 19 | 437 | 566 | - | - | |
Mepo5g00959 | 1262 | Gene3D | SWIB/MDM2 domain | 292 | 383 | IPR036885 | - | |
Mepo5g00959 | 1262 | MobiDBLite | consensus disorder prediction | 895 | 959 | - | - | |
Mepo5g00959 | 1262 | MobiDBLite | consensus disorder prediction | 611 | 630 | - | - | |
Mepo5g00959 | 1262 | ProSiteProfiles | Zinc finger C3H1-type profile. | 1237 | 1262 | IPR000571 | GO:0046872 | |
Mepo5g00959 | 1262 | MobiDBLite | consensus disorder prediction | 611 | 650 | - | - | |
Mepo5g00959 | 1262 | SUPERFAMILY | SWIB/MDM2 domain | 298 | 375 | IPR036885 | - | |
Mepo5g00959 | 1262 | SUPERFAMILY | GYF domain | 732 | 786 | IPR035445 | - | |
Mepo5g00959 | 1262 | Pfam | SWIB/MDM2 domain | 301 | 374 | IPR003121 | - | |
Mepo5g00959 | 1262 | MobiDBLite | consensus disorder prediction | 813 | 880 | - | - | |
Mepo5g00959 | 1262 | MobiDBLite | consensus disorder prediction | 864 | 880 | - | - | |
Mepo5g00959 | 1262 | SMART | swib_2 | 297 | 379 | IPR019835 | - | |
Mepo5g00959 | 1262 | ProSitePatterns | Zinc finger PHD-type signature. | 96 | 156 | IPR019786 | - | |
Mepo5g00959 | 1262 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 201 | IPR013083 | - | |
Mepo5g00959 | 1262 | MobiDBLite | consensus disorder prediction | 263 | 292 | - | - | |
Mepo5g00959 | 1262 | SUPERFAMILY | Plus3-like | 438 | 566 | IPR036128 | GO:0003677 | |
Mepo5g00959 | 1262 | CDD | PHD5_NSD | 95 | 140 | - | - | |
Mepo5g00959 | 1262 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED | 981 | 1262 | - | - | |
Mepo5g00959 | 1262 | MobiDBLite | consensus disorder prediction | 266 | 280 | - | - | |
Mepo5g00959 | 1262 | Gene3D | - | 735 | 791 | IPR035445 | - | |
Mepo5g00959 | 1262 | ProSiteProfiles | Zinc finger PHD-type profile. | 93 | 159 | IPR019787 | - | |
Mepo5g00959 | 1262 | CDD | SWIB-MDM2_like | 298 | 374 | - | - | |
Mepo5g00959 | 1262 | Pfam | Plus-3 domain | 441 | 544 | IPR004343 | GO:0003677 | |
Mepo5g00959 | 1262 | CDD | GYF | 733 | 788 | IPR003169 | GO:0005515 | |
Mepo5g00959 | 1262 | SUPERFAMILY | CCCH zinc finger | 1237 | 1261 | IPR036855 | GO:0046872 | |
Mepo5g00959 | 1262 | SMART | PHD_3 | 95 | 141 | IPR001965 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo5g00959 | Mepo-Chr5 | 9324382 | 9331061 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo5g00959 | 92 | 164 | PHD Transcription Factor Family | AT5G36670 | 36.000 | 6.96e-06 | 48.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SWI/SNF-BAF60b | Mepo5g00959 | Plus-3 | 1.7e-23 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo5g00959 | - | - | aprc:113869503 | 1907.88 |