Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00940 ATGAGAAAGGTAAGGGCTGGAACAGAATTTTGCATGGCAGAAGCAAATGTTGGTGATGTGTTGTCCAGACCCAAAAGGTTCTCATGGGAGAGTTTTGAGGAAGATACTTCTTCTAGTTCTGCAACTACAATCACTGCTTCTGGTCTCTTGGAACAGATAAACGTAACAAGGGATACAAGTGATTATCTTTGGTATATAACTAGTGTTGATGTAGGTTCATCCGAATCCTTTCTCCATGGAGGCAAGCTCCCCAGTCTCATTGTTCAGTCAACTGGGCATGCTGTGCATGTTTTCATCAATGGTCGACTTTCCGGTTCTGCCTATGGAACGAGGGAGGATAGGAGATTCAGATACACTGGCGATGTAAATCTTCGTGCTGGAACAAACACTATAGCTTTGCTCAGTGTTGCTGTTGGACTTCCAAACGTGGGTGGACATTTCGAGACTTGGAACACAGGAATTCTAGGTCCAGTTGTTATCCATGGACTTGATAAGGGAAAGTTGGATTTGTCTTGGCAGAAGTGGACTTACCAGGTTGGGCTGAAAGGAGAGGCCATGAATCTTGCATCTCCAGACGGTATCTCTTCTGTAGAGTGGATGCAATCGGCATTAGTTGTACAAAGAAATCAGCCACTGACATGGCACAAGACATTTTTCGATGCCCCTGAAGGAGAAGAGCCATTGGCATTGGATATGGACGGTATGGGTAAAGGTCAAATATGGATTAATGGGATAAGTATCGGAAGATACTGGACTGCTATAGCTACTGGTAGTTGCAATGACTGCAACTATGCCGGGTCATTTAGACCTCCAAAGTGCCAGCTTGGTTGCGGTCAACCAACTCAGCGATGGTACCATGTACCGCGATCTTGGTTGAAGCAAAATCATAATCTGTTAGTTGTTTTTGAGGAACTTGGGGGGGACCCTTCAAAAATTTCATTAGCAAAGAGATCAGTGAGCAGTGTGTGTGCTGATGTATCAGAGTATCATCCTAATCTTAAGAATTGGCACATTGATAGTTATGGAAAATCGGAAAATTTCCATCCTCCAAAAGTTCACTTGCATTGTAATCCTGGCCAAGCCATCTCTTCCATTAAATTTGCAAGCTTTGGAACTCCGTTGGGAACCTGTGGGAGTTATGAGCAAGGAGCTTGTCATTCTTCTGCATCATATGACATCCTAGAGCAGAAATGTATAGGAAAGCCAAGATGCATAGTAACTGTATCAAACAGTAATTTTGGGCGAGACCCGTGTCCGAATGTATTGAAGCGGTTATCAGTTGAAGCTGTTTGTGCTCCGACTATTACCAATTAA 1314 0.4361 MRKVRAGTEFCMAEANVGDVLSRPKRFSWESFEEDTSSSSATTITASGLLEQINVTRDTSDYLWYITSVDVGSSESFLHGGKLPSLIVQSTGHAVHVFINGRLSGSAYGTREDRRFRYTGDVNLRAGTNTIALLSVAVGLPNVGGHFETWNTGILGPVVIHGLDKGKLDLSWQKWTYQVGLKGEAMNLASPDGISSVEWMQSALVVQRNQPLTWHKTFFDAPEGEEPLALDMDGMGKGQIWINGISIGRYWTAIATGSCNDCNYAGSFRPPKCQLGCGQPTQRWYHVPRSWLKQNHNLLVVFEELGGDPSKISLAKRSVSSVCADVSEYHPNLKNWHIDSYGKSENFHPPKVHLHCNPGQAISSIKFASFGTPLGTCGSYEQGACHSSASYDILEQKCIGKPRCIVTVSNSNFGRDPCPNVLKRLSVEAVCAPTITN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00940 437 FunFam Beta-galactosidase 37 174 - -
Mepo5g00940 437 FunFam Beta-galactosidase 343 434 - -
Mepo5g00940 437 SUPERFAMILY Galactose-binding domain-like 173 339 IPR008979 -
Mepo5g00940 437 CDD Gal_Rha_Lectin_BGal 344 431 - -
Mepo5g00940 437 FunFam Beta-galactosidase 182 323 - -
Mepo5g00940 437 PRINTS Glycosyl hydrolase family 35 signature 237 253 IPR001944 GO:0004553|GO:0005975
Mepo5g00940 437 PRINTS Glycosyl hydrolase family 35 signature 210 224 IPR001944 GO:0004553|GO:0005975
Mepo5g00940 437 ProSiteProfiles SUEL-type lectin domain profile. 346 432 IPR000922 GO:0030246
Mepo5g00940 437 Gene3D - 343 436 IPR043159 -
Mepo5g00940 437 SUPERFAMILY Galactose-binding domain-like 29 164 IPR008979 -
Mepo5g00940 437 Gene3D - 21 161 - -
Mepo5g00940 437 Gene3D - 194 324 - -
Mepo5g00940 437 Pfam Galactose binding lectin domain 354 431 IPR000922 GO:0030246
Mepo5g00940 437 PANTHER BETA-GALACTOSIDASE RELATED 23 333 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00940 Mepo-Chr5 9111255 9114225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00940 25 433 Glycoside Hydrolase AT4G36360 75.122 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00940 - - gmx:100798501 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07901 3 92024830 92030257 Mepo5g00940 5 9111255 9114225 ECH
Mepo4g01822 4 23431235 23436127 Mepo5g00940 5 9111255 9114225 ECH
Mepo5g00940 5 9111255 9114225 Mepo5g00940 5 9111255 9114225 ECH