Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00927 ATGAGACCCCCAATGGTTGGTCGTTTCACTTCTTCATTCACAAACATTGGTTCAGCATCATCATGGTTTGAGGTATATGCTTCATTCTCCACATTCATGATGTTATTAAGAACTGCAATCAATGATCTCATACCCTTAAAACTTAGAAATTTCATCATCTCAAAGCTAAAACGTTTCTTCACAGATTGCCAACCAAATAACCAAGTTTCACTTCAAATTGATCAGTTTTGGGATGGAAGTACTAACCATCTTTACTATGCTGCCAAAGAGTATATCCCTACTAAAATATCCAACACTTACAAATCCCTCAAAGTTGGAAAAATATCCAGACATAACAACATAGTTCTTGCTTTTGATGGAAAACAAGTAGTGGAGGATGAGTTTGATGATATCAAGCTTAAATGGAGGCTTGTTGAAAATTCCAACAATGAAGATGGTTTAGATAATCCCAAAAAGGAGTATAAGGAATATAAGCATAGGTCAAAAGACTATGATGAAAATGGGTTTGTGTTAAGTTTTGATGAGAAGCATAGAGATAAAGTAATGGAGAAGTATATTCCACATGTTTTAAGCACTTATGAAGCTATAAAAGCAGGAAATAAAACTCTTAAGATTCATTCTATGCAATCTGGACCATGGAAACAAAGTGATTTAACACATCCTGCTTCATTTGATTCACTTGCTATGGATCCTGATCTAAAAAATTCTATAATTGATGATTTAGATCGGTTTTTGAGGAGGAAAAAGTTGTATAAAAAAGTTGGTAAGCCTTGGAAACGTGGTTACTTATTGTATGGGCCACCAGGAACTGGAAAATCTAGCCTTATTGCTGCTATGGCAAAGTACTTGAAATTTGATGTCTATGATTTGGATCTTAGCTCAGTGTTTTCTAACTCAGAACTCATGAGAGCCATGAGAGAGACTTCTAACAGATCTATCATTGTTTTTGAAGACATTGATTGCAATTCTGAGGTGCTTGATCGAGCAAAACCAGACAAGTTTCCAGATATGGATTTTTTAGATGGGATTAAGATGGTTAAGAACATGCCGCCTAGAAAGTTTACTTTGTCTGGTCTGCTTAACTATATGGATGGTTTGTGGTCAAGTTGTGGAGAGGAACGAATTTTGATATTTACGACGAACCATAAGGATAAAGTAGACCCGGCATTATTGCGCCCTGGCCGTATGGACATGCATATTCACTTATCCTTTCTTAAGGCCAAAGCATTCAGAATCTTAGCTTCAAATTATTTGGACATTGAAGGAAATCATCACTCACTCTTTGAACAAATTGAAGAGCTATTGGAAAAGGTTGATGTCTCACCTGCAGTAGTGGCAGAGTATCTATTGAGAAGTGAAGATCCTGATGTTGCTCTTGGAGCACTTGTTAAATTTCTTCAAGATCAAGAAATTAACATTTCAAAAGTTATTGTGAATGAAGAGACTAGTCAGCAAGTTTAG 1461 0.3593 MRPPMVGRFTSSFTNIGSASSWFEVYASFSTFMMLLRTAINDLIPLKLRNFIISKLKRFFTDCQPNNQVSLQIDQFWDGSTNHLYYAAKEYIPTKISNTYKSLKVGKISRHNNIVLAFDGKQVVEDEFDDIKLKWRLVENSNNEDGLDNPKKEYKEYKHRSKDYDENGFVLSFDEKHRDKVMEKYIPHVLSTYEAIKAGNKTLKIHSMQSGPWKQSDLTHPASFDSLAMDPDLKNSIIDDLDRFLRRKKLYKKVGKPWKRGYLLYGPPGTGKSSLIAAMAKYLKFDVYDLDLSSVFSNSELMRAMRETSNRSIIVFEDIDCNSEVLDRAKPDKFPDMDFLDGIKMVKNMPPRKFTLSGLLNYMDGLWSSCGEERILIFTTNHKDKVDPALLRPGRMDMHIHLSFLKAKAFRILASNYLDIEGNHHSLFEQIEELLEKVDVSPAVVAEYLLRSEDPDVALGALVKFLQDQEINISKVIVNEETSQQV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00927 486 ProSitePatterns AAA-protein family signature. 374 392 IPR003960 GO:0005524|GO:0016887
Mepo5g00927 486 Pfam Domain associated at C-terminal with AAA 44 138 IPR025753 -
Mepo5g00927 486 Pfam ATPase family associated with various cellular activities (AAA) 263 402 IPR003959 GO:0005524|GO:0016887
Mepo5g00927 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 454 IPR027417 -
Mepo5g00927 486 Gene3D - 215 400 IPR027417 -
Mepo5g00927 486 Gene3D - 401 475 - -
Mepo5g00927 486 CDD RecA-like_BCS1 237 402 - -
Mepo5g00927 486 PANTHER BCS1 AAA-TYPE ATPASE 25 469 - -
Mepo5g00927 486 SMART AAA_5 258 406 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00927 Mepo-Chr5 9010043 9012874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00927 260 434 Calmodulin-binding Proteins AT3G56690 28.877 1.75e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00927 - K08900 gmx:100787726 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00927 5 9010043 9012874 Mepo5g00927 5 9010043 9012874 ECH