Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00915 ATGGAGAAGACTCAACTGGATAACCTATTTCCTCTAACTCCAAGTGCCGTATTCTCTACAAAGAAGGGACGCAGTGGATATGAACCGTCAGACACAGAGACGGAGTGGCAAGACACTCCACGTCATGAACGAGGAAGAAAGAACAACATGACTTTGAGTCCTGAAGAAACAAAAGCTTTGTCTCCAAGGAACAAAAGTCCTATGACACTCCACAAGAGACACCCTTCAAGGTTTGAATTTGAAGTCCCTTCATCGCCTACAATAACAGGTTCAGTTCTTAATCAACCAAGAAGAAGACATCTCAGCAAATCACCCTATAGGCCACGCATAGCACATGATAATCATTATGATGTTGATGGTAATGATGATGATGCTTCGTTAACATACATAACAGGTGTGAACTCACGTAGAAATACGAGTCCTTTGCCAAGGCCTGACATTGGAAGAACAGTGTCTCCTTATAACAGAAACCGTGAGCAAAGAACACCTTATAATGAAAATAGGAAAGCAAGTTCAGGGCTTCTAGAAGTGGATAGAGTGAGTACAAAATCAAACTACAAGAGAGCAGTGACTGCTCCAAGATTGAGAGACCAACAACAAACAATGCAAAACACTGCAAGAACTCTGAAACAAAGGGAAAAATCTCCTTTCAAAACAGGTTTAGTTAAAGAAAAAGAAATCAATGAAATGATAGCAGAGGTGAAACTATCAAAAAACCCTACTGATGATTATTCATCAGCACTCGAAAGTACAGACTCAATTCAACCAGGTGATCTTTTCTTTTCTCGTGAATGCAATGCCTTGCAAGCGAAGAATTCTTCAATGCCAAAAAAAGTTCAACAATACGGGTATTTTAGCCCTAGACCAGTGATCACCACCATTAATCCCATTACCAACCCATCTGAAAGTGGTAAACACAGTATGAATATGAATATGCCAAGAAACTATTCAAGTAATGTGTTGTTGTCTCGAACAACGACGGCCACATCAATCAGAAAGGGAAGTGGAACTGGGAAGCCTAGTGCCAACTCTAGTGTGAAAAGTGATGCTAGTACAAAGACAACTGAAAGCATGAGGAAATTCACATCCAACAGAAAAAAGAACCAGAAAGATGCATGGTTTGCTTGTATGATGAGAACAGGAAACTGTAGGATTTCAAGAAAATCGCCTGAACGCAGACCCATTGATGAAGCTTCATTGATCGAGAGGGCAATAATTGTGGAAAGCATTCCACAATTATGGGCAGATAAACATAAACCAGCTTCACTTGATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAATTAGTGTCACAGGGCTCTTGTCCTCATATTTTACTCAAAGGACCCTCTGGTTCTGGGAAAAGAGACCTAGCAATGGCTTTTCTTAGAGAAATATATGGTGATGCATGTTGTAATCTGTCACATGATTTACGACATTTCCCTGTTCAGGACAAAAGGACCATGAAAGTGTCGGTTCCAATAACGTCCAGTTCTCATCATATCGAGCTCAATGTAAATTCAGAACCAAATGCTAAATATGCTTTGATGGGAACAATCAAAGAAATTAGTAATATATATGCAATTACCCCTGAAGTAAGTAATATGAATTTCAAGTCGGATTATAAAGTAATCATTGTTTACGATGTCGACAAAGCTGCAGAGAACATCCAACACTTGATCAAATGGATCATAGACCGTTATTCAGATATATGCAAATTAGTTCTCTGCTGTGAAGATGATGAAAACATTATTGCACAAGTGAAAAACCGGTTCAAAGTTATCAATGTTGATGCTCCTCAAACTCATGAAATTATTGAAGTTCTTACTCAGATAGCAAATAAAGAAGAAATGGATCTATCCATGAATTTTGCTATGAAGATTGCCACAAAATCTAAGCAGAACCTCAGGGAAGCAATCTTAGCTCTTGAAGCATGCAGAGCACACAACTACCCATTTTCAGAAGAACAACCAATTCCAGTCGGATGGGAGAAGATTGTAATAGAAGTTGCTACAGAGATCCTAACGGATCCATCATTTTCACGCTTACTCTCAATACGAGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCACCCCAGATTGATTCTCCGGAAACTTGTGGAGCAGCTCATAAGAAGAATTGAGGCTGGCTTAAAAAGGGAGCTCTACTACTGGCATGCTTATTATGACAGAAGACTCCCACCGGGAACAACAGCTTTACTAAAATTAGAAGAATTTGTAGCCAAGTTCATGAGCATATACAGAAGAAGCTCGGGCAGTAGGCAATATGTGTAA 2307 0.3949 MEKTQLDNLFPLTPSAVFSTKKGRSGYEPSDTETEWQDTPRHERGRKNNMTLSPEETKALSPRNKSPMTLHKRHPSRFEFEVPSSPTITGSVLNQPRRRHLSKSPYRPRIAHDNHYDVDGNDDDASLTYITGVNSRRNTSPLPRPDIGRTVSPYNRNREQRTPYNENRKASSGLLEVDRVSTKSNYKRAVTAPRLRDQQQTMQNTARTLKQREKSPFKTGLVKEKEINEMIAEVKLSKNPTDDYSSALESTDSIQPGDLFFSRECNALQAKNSSMPKKVQQYGYFSPRPVITTINPITNPSESGKHSMNMNMPRNYSSNVLLSRTTTATSIRKGSGTGKPSANSSVKSDASTKTTESMRKFTSNRKKNQKDAWFACMMRTGNCRISRKSPERRPIDEASLIERAIIVESIPQLWADKHKPASLDGFICNKQEAQLLKELVSQGSCPHILLKGPSGSGKRDLAMAFLREIYGDACCNLSHDLRHFPVQDKRTMKVSVPITSSSHHIELNVNSEPNAKYALMGTIKEISNIYAITPEVSNMNFKSDYKVIIVYDVDKAAENIQHLIKWIIDRYSDICKLVLCCEDDENIIAQVKNRFKVINVDAPQTHEIIEVLTQIANKEEMDLSMNFAMKIATKSKQNLREAILALEACRAHNYPFSEEQPIPVGWEKIVIEVATEILTDPSFSRLLSIRGKFQMLLLDFVHPRLILRKLVEQLIRRIEAGLKRELYYWHAYYDRRLPPGTTALLKLEEFVAKFMSIYRRSSGSRQYV 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00915 768 FunFam replication factor C subunit 3 604 662 - -
Mepo5g00915 768 Gene3D - 412 603 IPR027417 -
Mepo5g00915 768 Gene3D - 605 662 - -
Mepo5g00915 768 MobiDBLite consensus disorder prediction 1 20 - -
Mepo5g00915 768 Gene3D - 665 758 - -
Mepo5g00915 768 FunFam Replication factor C subunit 3 412 603 - -
Mepo5g00915 768 MobiDBLite consensus disorder prediction 106 122 - -
Mepo5g00915 768 MobiDBLite consensus disorder prediction 82 98 - -
Mepo5g00915 768 MobiDBLite consensus disorder prediction 328 364 - -
Mepo5g00915 768 SUPERFAMILY post-AAA+ oligomerization domain-like 665 758 IPR008921 GO:0003677|GO:0006260
Mepo5g00915 768 MobiDBLite consensus disorder prediction 1 171 - -
Mepo5g00915 768 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 414 747 - -
Mepo5g00915 768 MobiDBLite consensus disorder prediction 328 358 - -
Mepo5g00915 768 MobiDBLite consensus disorder prediction 127 141 - -
Mepo5g00915 768 MobiDBLite consensus disorder prediction 26 51 - -
Mepo5g00915 768 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 651 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00915 Mepo-Chr5 8919523 8923438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00915 413 759 Core DNA Replication Machinery Family AT5G27740 38.857 3.14e-82 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00915 K10756 - gmx:100795321 1013.45