Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00901 ATGAGAACCAATAGTGGTGAAATAGTGGAGACTTTTCCAAATAGCCTATCCTTTCAGGTACATAGTAAAATATGCATAGAATTGATGAAAATAGTGGACAGCATCATGAGGATATTTCCAGACATAGAGGAAGCACGACCAAGATGTTCATCAGGAATAGAGTCTCTATGTTTTCTGAACAACTCAATTGAGAAATCTAAATTACTTTTGCAACATTGCTCCGAATGCAGCAAACTCTACCTGGCTGTGACAGGAGAAACGGTACTTTCGAGATGCCAAAAAGTGAAAAAGTCATTAGAACAAAGCTTAATTCCCATCCAGGGTATGGTTCCAGTCATGTTGGCTGTAGAGGTTTCTAGAATAATTGATGATCTTGAGTGTGTTACATTTGTTCTGGATTCTGCTGAAGAAGAGGCTGGGAGAGTTGTAAGAGAATTGCTTCATCAAGGTTCAACCTCAGATTCCGTGGACGACTTTGAAGTTAAAGCTCTTCAGTTTGCAGCACCGAGACTGAAAATAACATCTCAAAAGGCCATTTTAATCGAGAAACGATCTATCAAGAAGTTTCTAGATAAAGTTGGACCAAATGACGCGAAAAAGAAGACGATCTTGAGATATCTTATGTATCTAATGAAAAAGCATGGAAAAAACTTAATGGTGGTGGGAGAACACACGGAGAATTTTTATTCTCGTAGTGAAGAACCAATTGCAAGGGATAACTCTAGCCGTGATTCCAGACGAAGAAATCGTGTTGAGCCAGATCATAGCATGAACTATGATCAGCATAAAACTGAGATGAATCAGTCAGATAGAGTGGCACCACCTGAAGAATACAAGTGTCCAATATCCTCAAGGTTGATGTATGATCCTGTTATCATTGCTTCTGGAGTAACATATGAAAGAATGTGGATAAGAAAGTGGATTAATGAGGGTAAAACTATATGTCCAAAAACAAAAAAGGAACTACCTCATATGACATTGACTCCAAATGTTGTCATGAAGGACTTGATATCAAAGTGGTGCAAAAATAATGGTGTCTCCATTCCTGATCCAAGTAGACATACAGAAGATTTTATGTTGTTGGATGCTTCAATCACCTCCATTAAGAGTTTGGGAAGTTATTTCAATGATCTGAACTTGCCAATGGATCTTACTAACATGTCACTTGGATCATTGGATAATAGTTTTAGTTCCGATGTGTCGCGAGTTAAGACCAATCATGCCTTGAATTTGATGATGACCAAGAGTAATGAAAATTCTCAGCCTCACAATCATACAGTTCATGCAGAGATACATGATACAGATTTGATGCTCTTGCCTCAACTTCATGATCTTCAATGGGATTCTCAATGTAAGATCATTGAAGATTTGAAAGATCATATGAAAAGCAATAGCCAAGCTATTTTGTCAGTGTCAGCTGAAAATTTAGTCGAACCAGTTGTCAGATTTTTAAGCAATGCAAATGATCGGCAGGACTTAAAAGCGCTGAGAGCCGGAACTCAGCTTCTGTCGGAATTTGTGAACAATTGCAGAAGTGGTATGGCTGACCTAAGTGAAGATACATTCATAAAGTTGGCAAATCTTCTTGACTCAGAAGTGATAGGAGATGTACTTGCCATAATGGAAGAACTTTCTGGAGATGGAAATAGTAAAGCCAAAATTGCAGCATCCAGTGCACTCACTTCTGTCTTAAAGTTACTTGATTCTGATAACAAAGGGTTCCAACAACATGCTATAAGAATAATCTACAATTTTTCCTTCAACAGTGAAGTTTGTCCACACATGGTATCTGTCAATTGCATCCCAAAATTGTTACCTTTTTTCAAAGACAGAGCTGTTTTGAGATACTGCATATATATCTTGAAAAACATCTGTGATACTGAAGAAGGTAGAAATTCTATTGCTGAAACAAAGGGATGCATAAGTTCTGTTGCTGAAATACTCGAGAGTGGAAGTAATGAAGAGCAAGAACATGCACTTGATGTTCTACTATCTTTATGTACATGTTCTCAAAATGTGGATTATTGTAAGTTGATTTCGGATGAAGAGATTATCACTCGTCTTTTCTATATCTCACAGAATGGAAATGATAAAGGAAAGGAAAGTGCCGTGGAATTGCTTCATATTTTGGGAGATGCAAAATATGTTGAGAATGAAGATAGGTCCTCTCAGCCAATTACCAACAACAGTTCTACAGATTCCAACAGTCATCCTGAAAAAAATAGATCATCAAAGAAATCACCATTTCTGAAGAAACTAGGATTGTTCTCGAAATCTACTCCACATGCATCAAAACCCAGAAGGTGA 2307 0.3749 MRTNSGEIVETFPNSLSFQVHSKICIELMKIVDSIMRIFPDIEEARPRCSSGIESLCFLNNSIEKSKLLLQHCSECSKLYLAVTGETVLSRCQKVKKSLEQSLIPIQGMVPVMLAVEVSRIIDDLECVTFVLDSAEEEAGRVVRELLHQGSTSDSVDDFEVKALQFAAPRLKITSQKAILIEKRSIKKFLDKVGPNDAKKKTILRYLMYLMKKHGKNLMVVGEHTENFYSRSEEPIARDNSSRDSRRRNRVEPDHSMNYDQHKTEMNQSDRVAPPEEYKCPISSRLMYDPVIIASGVTYERMWIRKWINEGKTICPKTKKELPHMTLTPNVVMKDLISKWCKNNGVSIPDPSRHTEDFMLLDASITSIKSLGSYFNDLNLPMDLTNMSLGSLDNSFSSDVSRVKTNHALNLMMTKSNENSQPHNHTVHAEIHDTDLMLLPQLHDLQWDSQCKIIEDLKDHMKSNSQAILSVSAENLVEPVVRFLSNANDRQDLKALRAGTQLLSEFVNNCRSGMADLSEDTFIKLANLLDSEVIGDVLAIMEELSGDGNSKAKIAASSALTSVLKLLDSDNKGFQQHAIRIIYNFSFNSEVCPHMVSVNCIPKLLPFFKDRAVLRYCIYILKNICDTEEGRNSIAETKGCISSVAEILESGSNEEQEHALDVLLSLCTCSQNVDYCKLISDEEIITRLFYISQNGNDKGKESAVELLHILGDAKYVENEDRSSQPITNNSSTDSNSHPEKNRSSKKSPFLKKLGLFSKSTPHASKPRR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00901 768 Pfam U-box domain 275 344 IPR003613 GO:0004842|GO:0016567
Mepo5g00901 768 MobiDBLite consensus disorder prediction 231 260 - -
Mepo5g00901 768 SUPERFAMILY ARM repeat 438 710 IPR016024 -
Mepo5g00901 768 CDD RING-Ubox_PUB 275 327 IPR045210 -
Mepo5g00901 768 ProSiteProfiles U-box domain profile. 273 347 IPR003613 GO:0004842|GO:0016567
Mepo5g00901 768 SMART Ubox_2 277 340 IPR003613 GO:0004842|GO:0016567
Mepo5g00901 768 Gene3D - 437 710 IPR011989 -
Mepo5g00901 768 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 347 IPR013083 -
Mepo5g00901 768 MobiDBLite consensus disorder prediction 720 737 - -
Mepo5g00901 768 Pfam Kinesin-associated protein (KAP) 536 668 - -
Mepo5g00901 768 PANTHER U BOX DOMAIN-CONTAINING 27 718 - -
Mepo5g00901 768 MobiDBLite consensus disorder prediction 718 768 - -
Mepo5g00901 768 SUPERFAMILY RING/U-box 269 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00901 Mepo-Chr5 8819225 8824150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00901 17 756 U-box Gene Family AT4G36550 36.063 5.75e-140 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00901 - - psat:127120233 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00901 5 8819225 8824150 Mepo5g00901 5 8819225 8824150 ECH
Mepo1g02057 1 21198845 21204812 Mepo5g00901 5 8819225 8824150 ECH
Mepo5g00901 5 8819225 8824150 Mepo1g02057 1 21198845 21204812 PCT