Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00900 ATGGCATCATGGACACCAAGGCAAAACAAACTATTTGAAGAGGCCCTTGCTATATATGATAGGGAAACACCTGACAGGTGGCACAATGTGGCTAAAATGGTCGGAAAATCTGTTGAGGATGTTAAAAGGCACTATGAGATACTCAAAGAGGATATCAAGCGCATTGAGCGTGGTGAGGTCGCTTATCCTTATTAA 195 0.4256 MASWTPRQNKLFEEALAIYDRETPDRWHNVAKMVGKSVEDVKRHYEILKEDIKRIERGEVAYPY 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00900 64 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 63 IPR044636 GO:0003700
Mepo5g00900 64 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Mepo5g00900 64 Gene3D - 1 62 - -
Mepo5g00900 64 CDD SANT 3 49 IPR001005 -
Mepo5g00900 64 SMART sant 1 51 IPR001005 -
Mepo5g00900 64 Coils Coil 38 58 - -
Mepo5g00900 64 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Mepo5g00900 64 FunFam Transcription factor SRM1 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00900 Mepo-Chr5 8808256 8808450 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo5g00900 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00900 - - pvu:PHAVU_003G254400g 112.464