Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00869 ATGTCTTCCCCTCCTGATTCTGATAACTCTTCTTCGACGCCTTCAGATTCTCCACCAGAAGAGTCACCACAATCACCACCACCATCACCGCCTTCAGAATCACCGCCACCGCCACCACCTTCAGAATCACAACCTTCTCCTCCACCACCTACATCAAATAAACCATCCCCACCATCCCCCAATGGATCCGGAAATTCACCAACTCCGGTAGCGGGACATCCTCCACCAGCCTCCAATAGATCCGGAAATTCACAACCACCTCCACACAAAGTACCACCAACCGGACACTCAAATGGTAATCACAACAACAATAGCAATAACAATAACAATGATGATACCACTAAGGCAATAGTTGGAGCAGTGATTGGGGTGGCAGTTGCTCTTATCATTTTGGTCATCGTTTGCTTTGTCTGCTGCAGGAAGAAGAAAAGAAAGCAAGTGTACTATTATGGAGAACGCCCACCTCCTGGAAAAGGGAATAGTAACTATTACACTAGTGGGCATCACTCAAATTACTATGGAGATCTGCACGGGGAACATGTTGTTAGGGTTCAAAATGGAATGGGTCCAAATGGTGGTGGTGGATGGGGTGCACCACCACCTCCTCCTATGGGAATGAACAGTACAGACATGAGCTCGAATTATTCGGGCGGACCACCACCTCTTCCTCCTCCCTCACCAAGCCTTGCTTTAGGGCTTAAAGGCACATTCACTTATGAGGAATTGGCAGCTGCAACCGACGGATTCATTGATTCAAATTTGATAGGACAAGGTGGTTTTGGCTATGTCCATAAGGGTGTGTTGCCGAGTGGAAAGGAAATAGCTGTCAAGAGTTTAAAATCGGGTAGCGGACAAGGAGAACGGGAGTTCCAAGCTGAGATTGACATCATTAGTCGTGTTCATCATCGCCATCTTGTTTCACTTGTTGGATATTGTATTTCTGGTGGACAAAGAATGTTGGTCTATGAATTTATTTCCAATAACACATTGGAGTATCATCTGCATGGAAAGGGTCGACCTACCATGGATTGGCCGACGAGAATGAGGATTGCAATTGGTTCTGCTAAAGGGCTTGCTTATCTTCATGAGGATTGTCATCCACGCATTATCCATCGTGATATAAAAGCTGCAAATGTCCTTATTGATGATGGCTTTGAAGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACATCTGATAATAATACTCACGTATCAACTCGTGTGATGGGAACTTTCGGGTATCTAGCCCCTGAATATGCATCAAGTGGAAAATTGACAGAGAAGTCTGACGTTTTCTCATTTGGGGTCATGCTATTGGAACTTATAACTGGGAAGCGACCTGTGGATGCCACAATTACCATGGACGATAGCTTAGTCGACTGGGCTCGACCACTATTGACTCGTGGACTCGAGGAGGATGGAAACTTTAGCGACTTGGTGGATCCATTTTTGGAAGGAAACTATGATCCTCAAGAACTCGCAAGAATGGCAGCTTGCGCTGCTGCTAGCATTCGTCACTCTGCCAGGAAGCGTTCTAAAATGAGTCAGATTGTAAGAACATTGGAAGGAGATGTCTCACTGGATGACTTGAAGGAGGGAATTAAGCCAGGGCACGCCACTGTTAATACCTCATCTGGTAGCGAGTATGACACAGTGCAGTACAACAGTGATAAGCAGAAGATCAGAAAGACGGTGTTTTCCAGCCATGAATCTAACACCAGCAGCTACTCCAGTAGTGGCGAGATGGGCCAAACTCCACCAAAGCTGAAGTCTCCACAACCATTGCCTTAA 1794 0.4599 MSSPPDSDNSSSTPSDSPPEESPQSPPPSPPSESPPPPPPSESQPSPPPPTSNKPSPPSPNGSGNSPTPVAGHPPPASNRSGNSQPPPHKVPPTGHSNGNHNNNSNNNNNDDTTKAIVGAVIGVAVALIILVIVCFVCCRKKKRKQVYYYGERPPPGKGNSNYYTSGHHSNYYGDLHGEHVVRVQNGMGPNGGGGWGAPPPPPMGMNSTDMSSNYSGGPPPLPPPSPSLALGLKGTFTYEELAAATDGFIDSNLIGQGGFGYVHKGVLPSGKEIAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFISNNTLEYHLHGKGRPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDGFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDATITMDDSLVDWARPLLTRGLEEDGNFSDLVDPFLEGNYDPQELARMAACAAASIRHSARKRSKMSQIVRTLEGDVSLDDLKEGIKPGHATVNTSSGSEYDTVQYNSDKQKIRKTVFSSHESNTSSYSSSGEMGQTPPKLKSPQPLP 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00869 597 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 124 565 IPR047117 -
Mepo5g00869 597 MobiDBLite consensus disorder prediction 188 224 - -
Mepo5g00869 597 MobiDBLite consensus disorder prediction 95 111 - -
Mepo5g00869 597 MobiDBLite consensus disorder prediction 1 18 - -
Mepo5g00869 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Mepo5g00869 597 Pfam Protein tyrosine and serine/threonine kinase 254 452 IPR001245 GO:0004672|GO:0006468
Mepo5g00869 597 MobiDBLite consensus disorder prediction 1 111 - -
Mepo5g00869 597 ProSiteProfiles Protein kinase domain profile. 249 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00869 597 SMART serkin_6 249 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00869 597 ProSitePatterns Protein kinases ATP-binding region signature. 255 277 IPR017441 GO:0005524
Mepo5g00869 597 FunFam proline-rich receptor-like protein kinase PERK1 228 324 - -
Mepo5g00869 597 MobiDBLite consensus disorder prediction 19 93 - -
Mepo5g00869 597 FunFam Proline-rich receptor-like protein kinase PERK1 325 533 - -
Mepo5g00869 597 MobiDBLite consensus disorder prediction 539 587 - -
Mepo5g00869 597 Gene3D Phosphorylase Kinase; domain 1 228 324 - -
Mepo5g00869 597 Gene3D Transferase(Phosphotransferase) domain 1 325 533 - -
Mepo5g00869 597 MobiDBLite consensus disorder prediction 537 597 - -
Mepo5g00869 597 SUPERFAMILY Protein kinase-like (PK-like) 223 522 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00869 Mepo-Chr5 8440671 8444232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00869 81 575 Trihelix Transcription Factor Family AT1G70460 50.100 7.71e-150 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mepo5g00869 PK_Tyr_Ser-Thr 1.1e-45 CL0016