Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo5g00855 | ATGAACCATCAAGACCAAATGATGCTTATGTCTCAGTTATTCCCAGCTTGTGAATACACCCAAATCATTTCTCAACAAGGGGAGAAGAAGCCAAAGCCAAGACGCAAGCGTAGTAAGAAGAACAAAGGTGGAGAAAACAGTGCTGGTGAAATGAACAAAAAGAGGAAATTGAGTGATGAACAAGTGAATATTTTGGAGGAAAACTTTGGAAATGAACATAAACTTGAGTCAGAGAAGAAGGATAGACTTGCAATGGAGCTTGGCTTAGATCCTAGACAAGTTGCAGTTTGGTTCCAGAATCGAAGAGCTAGGTGGAAGAACAAGAAACTTGAAGAAGAGTACTTAAGTCTTAAAAAAAATCATGAATCCACCATGCTTGAGAAGTGTCTCCTTGAAACCAAGGTGTTGAAGCTAACGGAGCAACTCTCAAAAGCTGAGAAAGAAAATCAAAGGCTTCGAGAGCCAATTGAAAGGGTAACAAGCAGCAGTTCAAGTACTTCATCCATGTCTCAGTCAGTGGAAGTTGTGGACCCACCTTTTCTTGGTGAATTTGGTGTTGATAATGGATATGATGATGATGTGTTTTTCATGCCTAATGAAACATGTTACTACAATGGCATGGAATGGATAAGTTTGTACACGTAG | 645 | 0.3969 | MNHQDQMMLMSQLFPACEYTQIISQQGEKKPKPRRKRSKKNKGGENSAGEMNKKRKLSDEQVNILEENFGNEHKLESEKKDRLAMELGLDPRQVAVWFQNRRARWKNKKLEEEYLSLKKNHESTMLEKCLLETKVLKLTEQLSKAEKENQRLREPIERVTSSSSSTSSMSQSVEVVDPPFLGEFGVDNGYDDDVFFMPNETCYYNGMEWISLYT | 214 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo5g00855 | 214 | Pfam | Homeodomain | 53 | 107 | IPR001356 | GO:0003677 | |
Mepo5g00855 | 214 | Coils | Coil | 100 | 127 | - | - | |
Mepo5g00855 | 214 | SMART | HOX_1 | 51 | 112 | IPR001356 | GO:0003677 | |
Mepo5g00855 | 214 | MobiDBLite | consensus disorder prediction | 156 | 171 | - | - | |
Mepo5g00855 | 214 | MobiDBLite | consensus disorder prediction | 42 | 59 | - | - | |
Mepo5g00855 | 214 | FunFam | homeobox-leucine zipper protein ATHB-40 | 47 | 116 | - | - | |
Mepo5g00855 | 214 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 25 | 167 | IPR045224 | GO:0003700 | |
Mepo5g00855 | 214 | MobiDBLite | consensus disorder prediction | 24 | 59 | - | - | |
Mepo5g00855 | 214 | Gene3D | - | 44 | 116 | - | - | |
Mepo5g00855 | 214 | ProSiteProfiles | 'Homeobox' domain profile. | 48 | 108 | IPR001356 | GO:0003677 | |
Mepo5g00855 | 214 | SUPERFAMILY | Homeodomain-like | 52 | 114 | IPR009057 | - | |
Mepo5g00855 | 214 | Coils | Coil | 135 | 155 | - | - | |
Mepo5g00855 | 214 | PRINTS | Lambda-repressor HTH signature | 79 | 88 | IPR000047 | GO:0003677 | |
Mepo5g00855 | 214 | PRINTS | Lambda-repressor HTH signature | 88 | 104 | IPR000047 | GO:0003677 | |
Mepo5g00855 | 214 | MobiDBLite | consensus disorder prediction | 146 | 171 | - | - | |
Mepo5g00855 | 214 | ProSitePatterns | 'Homeobox' domain signature. | 83 | 106 | IPR017970 | GO:0000981|GO:0006355 | |
Mepo5g00855 | 214 | CDD | homeodomain | 53 | 109 | IPR001356 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo5g00855 | Mepo-Chr5 | 8319020 | 8320706 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo5g00855 | 7 | 214 | Homeobox Transcription Factor Family | AT4G36740 | 54.976 | 1.01e-67 | 205 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-other | Mepo5g00855 | Homeodomain | 7e-18 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo5g00855 | K09338 | - | gmx:100810736 | 296.589 |