Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00836 ATGTTTCCAACATTTTCATTTTGGTTATCTCTTCTCATTGCTTTCAACTTTGTCCAAAACACATTTACTTCTACATTAGGAACTGCGACCGATAACTTGGCTTTGCTCAAGTTCAAAGAATCAATATCTAATGACCCATATGGAATCTTGGCCTCTTGGAATAGTTCAACTCACTTCTGCAAGTGGTATGGAATCACATGCAGTCCCATGCATCAAAGAGTTACAGAGTTAAACGTAGAAGGATATCGGTTGCATGGATTGATATCTCCCCATGTTGGCAATCTCTCTTTTTTGAGAAACCTCAACCTTGCAAAAAATAGTTTCTTCGGAAAAATCCCACAGAAACTCGGTCAGTTGTTTCGATTGCAGGAACTCGTACTCAGCGATAACTCCTTGACAGGGGAGATTCCTACAAACTTGACGAGTTGCTCTAATCTTGAATTCTTATACTTGACTGGAAATCATCTTATTGGTAAAATACCAATTGGAATAAGCTCTCTTCAAAAGCTTCAAGTGTTGGAGATTTCAAAAAACAATTTAACCGGAAGAATACCACCATTCATTGGAAATCTTTCATGGCTAGCTATTCTTTCAGTGGGTGATAACCACTTAGAGAGAGACATTCCACAAGAAATATGCAGCCTCAAAAACTTAACAATAATGTCAGTGTTTCTAAACAGACTATCTAATACACTACCTTCTTCTTGTCTTTATAATATGTCATCTCTTACTTTCATTTCTGCTGCATTCAATAATTTTAATGGATCTCTTCCACCCAATATGTTCAACACCCTCTCCAACCTTCAATATTTAGCAATCGGAGGAAATCAATTCTCAGGTACAATCCCTATTTCCATTTCAAATGCTTCTTCCCTATTTTATCTTGACTTAGATCAAAACAATTTGGTCGGACAAGTTCCAAGTCTAGGGAAGTTACATGATCTTCGACGGTTAAATCTAGAGTTAAACAGTTTAGGTGACAATTCCACTACGGATTTAGAGTTTTTAAAATCCTTGACAAACTGTAGTAAACTACTAGTGACTTCCATATCCTTTAATAATTTTGGAGGTAATTTGCCAAATTCCATTGGCAATTTATCCACTCAACTTCGTCAACTACATTTTGGATTTAATATGATATCAGGAAAAATTCCAGAAGAATTAGGAAATCTAATTGGCTTAACTTTGTTGAGCATGGAACTTAACAACTTTGAAGGAATTATTCCTACTACTTTTGGGATGTTGGAGAAAATGCAACTATTAGATTTGAAGGGAAATAAGTTGTCCGGAGAGGTACCACCCATCATAGGCAACCTCAGTCAATTATATCATTTGAGTATAGGAGATAATATGTTAGAAGGAGATATTCCGTCAAGTATAGGAAACTGCAAAAAGTTACAATACCTGGACCTTGCACTAAACAATCTTAGAGGAACCATACCCTTAGAAGTTTTTAGTCTTTCTTCGTTATCAAACTTACTGAACTTGTCAAGAAACTCATTGAGTGGTAGCCTGCCGAGAGAAGTGGGTATGCTAAAAAGTATCAACAAGCTAGATGTCTCGGAGAATCTTCTATCTGGTGACATTCCTAGAGCCATTGGCGAATGCATACGCTTAGAGTACCTCTTTTTGCAAGGAAACTCCTTCAACGGAACCATACCATCCTCATTGGCTTCACTTAAAAGTCTTCAATATTTAGACCTGTCAAGAAATCGGTTGTATGGACCAATTCCTAATGTTCTACAGAATATATCAGTTTTAGAACAATTGAATGTTTCTTTCAACATGTTGGAAGGCGAGGTACCAACAGAAGGTGTCTTTGGAAATGTAAGCGAGTTCGTTGTGACCGGAAACAATAAACTTTGTGGAGGTATTTCAAAGCTACATCTAGAGCCATGCCCTGTCAAAAGTATTAAACCTGCAAAACACCAAAAAATCAAGATGATAGCAGTGATTGTTAGTGGGGTATCTATTCTTCTCATGGCGACAATTATTTTAACTGTCTACAAGATGAGGAAAAGAAACAAGAAACCAAATTCTGATTTACTAAAAATTGACCCACTAGCTAAAGTTTCATACCAAGACCTTCACCAAGCAACTGATGGGTTTTCTGGTAGAAACTTAGTTGGATCAGGAAGTTTTGGTTCTGTGTACAAAGGAAATCTTGAATCAGAAGATAAAGTTGTTGCCGTAAAGGTCATTAACCTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCATTAAAAAACATTAGACATCGAAATTTGGTTAAGATTTTGACATGTTGTTCAAGTACAGATTACAAAGGTCAAGAATTTAAAGCTTTAGTTTTTGAATACATGAACAATGGAAACTTGGAACAATGGCTACATCCAGGGACAGTGAATGTAGAGAACCAAAGAATGTTGGACCTTGATCAAAGATTAAATATCACTATTGATATTGCTTTTGTACTACATTACCTTCATCTTGAATGTGAGCAATCGATCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGACGATGTCATGGTTGCCCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAGTTATTGACGACACCTCTCATCGGGAATCTAGTACAATTGGAATTAAAGGGACTATTGGCTATGCTCCTCCAGGTATTTTTATAGACTCTTAA 2685 0.3665 MFPTFSFWLSLLIAFNFVQNTFTSTLGTATDNLALLKFKESISNDPYGILASWNSSTHFCKWYGITCSPMHQRVTELNVEGYRLHGLISPHVGNLSFLRNLNLAKNSFFGKIPQKLGQLFRLQELVLSDNSLTGEIPTNLTSCSNLEFLYLTGNHLIGKIPIGISSLQKLQVLEISKNNLTGRIPPFIGNLSWLAILSVGDNHLERDIPQEICSLKNLTIMSVFLNRLSNTLPSSCLYNMSSLTFISAAFNNFNGSLPPNMFNTLSNLQYLAIGGNQFSGTIPISISNASSLFYLDLDQNNLVGQVPSLGKLHDLRRLNLELNSLGDNSTTDLEFLKSLTNCSKLLVTSISFNNFGGNLPNSIGNLSTQLRQLHFGFNMISGKIPEELGNLIGLTLLSMELNNFEGIIPTTFGMLEKMQLLDLKGNKLSGEVPPIIGNLSQLYHLSIGDNMLEGDIPSSIGNCKKLQYLDLALNNLRGTIPLEVFSLSSLSNLLNLSRNSLSGSLPREVGMLKSINKLDVSENLLSGDIPRAIGECIRLEYLFLQGNSFNGTIPSSLASLKSLQYLDLSRNRLYGPIPNVLQNISVLEQLNVSFNMLEGEVPTEGVFGNVSEFVVTGNNKLCGGISKLHLEPCPVKSIKPAKHQKIKMIAVIVSGVSILLMATIILTVYKMRKRNKKPNSDLLKIDPLAKVSYQDLHQATDGFSGRNLVGSGSFGSVYKGNLESEDKVVAVKVINLQKKGAHKSFIAECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVFEYMNNGNLEQWLHPGTVNVENQRMLDLDQRLNITIDIAFVLHYLHLECEQSIIHCDLKPSNVLLDDVMVAHVSDFGIARLVSVIDDTSHRESSTIGIKGTIGYAPPGIFIDS 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00836 894 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Mepo5g00836 894 SUPERFAMILY Protein kinase-like (PK-like) 678 892 IPR011009 -
Mepo5g00836 894 Pfam Protein kinase domain 707 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00836 894 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 30 138 - -
Mepo5g00836 894 SUPERFAMILY L domain-like 368 623 - -
Mepo5g00836 894 ProSiteProfiles Protein kinase domain profile. 703 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00836 894 SUPERFAMILY L domain-like 30 324 - -
Mepo5g00836 894 Gene3D Transferase(Phosphotransferase) domain 1 785 894 - -
Mepo5g00836 894 SMART LRR_typ_2 391 414 IPR003591 -
Mepo5g00836 894 SMART LRR_typ_2 560 583 IPR003591 -
Mepo5g00836 894 SMART LRR_typ_2 119 143 IPR003591 -
Mepo5g00836 894 SMART LRR_typ_2 487 512 IPR003591 -
Mepo5g00836 894 SMART LRR_typ_2 265 289 IPR003591 -
Mepo5g00836 894 SMART LRR_typ_2 167 191 IPR003591 -
Mepo5g00836 894 SMART LRR_typ_2 415 439 IPR003591 -
Mepo5g00836 894 Gene3D Ribonuclease Inhibitor 340 633 IPR032675 -
Mepo5g00836 894 FunFam LRR receptor-like serine/threonine-protein kinase EFR 673 784 - -
Mepo5g00836 894 Pfam Leucine Rich repeats (2 copies) 121 161 IPR025875 -
Mepo5g00836 894 Pfam Leucine rich repeat 252 302 IPR001611 GO:0005515
Mepo5g00836 894 Pfam Leucine rich repeat 538 597 IPR001611 GO:0005515
Mepo5g00836 894 FunFam LRR receptor-like serine/threonine-protein kinase EFR 331 639 - -
Mepo5g00836 894 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Mepo5g00836 894 Gene3D Ribonuclease Inhibitor 194 339 IPR032675 -
Mepo5g00836 894 PANTHER OS04G0122200 PROTEIN 99 235 - -
Mepo5g00836 894 FunFam Leucine-rich repeat receptor protein kinase EMS1 139 235 - -
Mepo5g00836 894 ProSitePatterns Protein kinases ATP-binding region signature. 709 732 IPR017441 GO:0005524
Mepo5g00836 894 SMART serkin_6 703 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo5g00836 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Mepo5g00836 894 Gene3D Phosphorylase Kinase; domain 1 664 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00836 Mepo-Chr5 8098864 8101548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00836 30 888 Receptor kinase-like Gene Family AT3G47570 46.154 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo5g00836 Pkinase 4.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00836 - - gmx:100801459 1149.81