Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00828 ATGGGAATAGCAACACTATCTTCTTCCATTGTTCACTTGAAGACACACCAAAACCAAAGAACCTTTGATTGTTCAATTTCAAATTCTATGTCCCAAGATTATCAGCAAGCAATCTTCGGCTTCCCCTCGAATGGATTCGAGAGATCATCGTCGTCACAGCAGCAGCAGCAACAACAGATCCAAAGGGACAAAGTTAGGCTGCTACAAGGGTTGAATTTATCAGAAGGAGAAGGAGAAGAAAGAGGAGGTGTGTATGAAACAGCAGGTATGTTATCAGAGATGTTTAATTTTGCTGATCCTTCAACAGCTGAATTGTTAGAAACCGCAACGTTTCGTTCTTCTTCTTCTTCTTCTTCAAGACAACATCCACATACAACAGCTTCAGAAAATGATTGGTATGGTAATAACAGACAAGGGATTCAGCAGCAACAGATTTCAAGCATTAATGTAGCAGCTGATTCAGCTGCTGCCATGCAACTTTTTCTCATGAACCCTTCTCAATCTCATCAAACTACAACTTCATCATCTTCTCCTCCTCCTCCACCTCATCATCAAAATTCTTCAACTCTTCACATGTTACTCCCTAACCCTCCTAATAATTCCTTACAAGGTTTTCCAAATTCTGGTAATTTTGGACAATTCACATGGAATAGTACTACTACTCAAGAAGGTGCTGTTGAAGGACAAGGACAAGGTGTTCAAGGTCTTTCATTATCATTATCTTCTTCATTGGAAGCTGCAAAAGCCGAGGAAGAATTGCGAATGGGAGGAGGAGGAGGAGGAGATGGTGGTAGTTTTATGTATAATAATTACAATATTCAAGGTGGAAGTGGAGGACCATCTTCTTCATCATATCCGTACAAATTAAATCATCAACAAGCATTGAATTTACAATTGCAAGGAGGAGGGACCATTAATGGATACCAATTATTACAAAGTCATAATCAAGGATATGGAAGTGTAGTAGTAAATGTTTTAAGAAATTCAAAATACATGAAACCTACTCAAGAATTACTTCAAGAGTTTTGCAGTGTTGGAAGGGGTCAGTTTATTAAAAAGACCAAGTTCAATAGACAAAATTCATCAAACCCTAATAATTGTTCCAATGTTGGTGATTCTTCTATTCCTTCCTCTTCATCAAAAGACACTCCTCCTCTTCCTTTGTCTGCTGCAGATAGGATTGAACATCAAAGAAGGAAGGTCAAGCTTCTTTCCATGCTTGATGAGGTGGACAGGAGATACAATCACTATTGTGAACAAATGCAAATGGTAGTGAACTCATTTGATGTGATGATGGGTTTTGGAGCAGCAGTTCCATACACAGCACTAGCACAAAAAGCAATGTCTCGACATTTTCGGTGTCTAAAGGATGCAATAACAGCACAAGTGAAGCAAAGTTGTGAGTTACTAGGTGAGAAAGAAGGCGCAGGAGGAGGTTTAACCAAAGGTGAGACCCCTAGGCTTAAGGTCCTTGAACAAAGCCTAAGACAACAAAGAGCATTTCACCAGATGGGTATGATGGATCAAGAAGCTTGGAGACCACAAAGAGGCTTGCCTGATCGTTCTGTCAATGTTTTGAGAGCTTGGCTTTTCGAGCATTTTCTACACCCGTATCCAAGTGATGCAGATAAGCATCTATTGGCACGACAAACTGGGCTATCACGAAATCAGGTATCAAACTGGTTCATAAATGCCAGGGTTAGATTGTGGAAACCTATGGTAGAAGAGATGTACCAACAAGAACTTAATGAAGCAGAGGTTGAAGCAGAAGAAAGAGAAATGAACCAAAGCAATAGCAACAACAGTGGTCACCAAACACAAACACCACCAACATCAACAGCAACAGCAACAGAGCCACCACCACCCCAAAAAAGAACTAATATCAATGCAGCTGAAAACGACCCTTCACTAGTTGCAATCAATAGACAGCAAGACTTCTCAGAAAACCAAGCAATTCAATCCACAACCACCATAAACACCACCGTCTCTGAGGTGGTTCCACCCTTTGATTCAGACCTGCCACCACACAGATCAATGGCCATGGATGACACGTGTCGATATGGAAGCTTAGTTGCAGAAGATTATGAAACAGGTTCTGACATTGGATCATCAACTCTTATTAGATTTGGGTCCACTACTACTGGTGACGTGTCACTCACGTTAGGGTTACGCCATGCTGGCAATGTGCCTGATAAAAATAATAACTTTCTCTATTAG 2217 0.4064 MGIATLSSSIVHLKTHQNQRTFDCSISNSMSQDYQQAIFGFPSNGFERSSSSQQQQQQQIQRDKVRLLQGLNLSEGEGEERGGVYETAGMLSEMFNFADPSTAELLETATFRSSSSSSSRQHPHTTASENDWYGNNRQGIQQQQISSINVAADSAAAMQLFLMNPSQSHQTTTSSSSPPPPPHHQNSSTLHMLLPNPPNNSLQGFPNSGNFGQFTWNSTTTQEGAVEGQGQGVQGLSLSLSSSLEAAKAEEELRMGGGGGGDGGSFMYNNYNIQGGSGGPSSSSYPYKLNHQQALNLQLQGGGTINGYQLLQSHNQGYGSVVVNVLRNSKYMKPTQELLQEFCSVGRGQFIKKTKFNRQNSSNPNNCSNVGDSSIPSSSSKDTPPLPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVMMGFGAAVPYTALAQKAMSRHFRCLKDAITAQVKQSCELLGEKEGAGGGLTKGETPRLKVLEQSLRQQRAFHQMGMMDQEAWRPQRGLPDRSVNVLRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELNEAEVEAEEREMNQSNSNNSGHQTQTPPTSTATATEPPPPQKRTNINAAENDPSLVAINRQQDFSENQAIQSTTTINTTVSEVVPPFDSDLPPHRSMAMDDTCRYGSLVAEDYETGSDIGSSTLIRFGSTTTGDVSLTLGLRHAGNVPDKNNNFLY 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00828 738 ProSiteProfiles 'Homeobox' domain profile. 509 572 IPR001356 GO:0003677
Mepo5g00828 738 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 173 600 - -
Mepo5g00828 738 MobiDBLite consensus disorder prediction 109 135 - -
Mepo5g00828 738 MobiDBLite consensus disorder prediction 584 632 - -
Mepo5g00828 738 MobiDBLite consensus disorder prediction 356 385 - -
Mepo5g00828 738 MobiDBLite consensus disorder prediction 41 60 - -
Mepo5g00828 738 MobiDBLite consensus disorder prediction 166 197 - -
Mepo5g00828 738 SMART HOX_1 512 576 IPR001356 GO:0003677
Mepo5g00828 738 MobiDBLite consensus disorder prediction 356 392 - -
Mepo5g00828 738 Pfam Homeobox KN domain 529 568 IPR008422 GO:0003677|GO:0006355
Mepo5g00828 738 MobiDBLite consensus disorder prediction 594 632 - -
Mepo5g00828 738 Pfam Associated with HOX 325 460 IPR006563 -
Mepo5g00828 738 SUPERFAMILY Homeodomain-like 513 579 IPR009057 -
Mepo5g00828 738 Gene3D - 515 577 - -
Mepo5g00828 738 Coils Coil 575 600 - -
Mepo5g00828 738 CDD homeodomain 512 573 IPR001356 GO:0003677
Mepo5g00828 738 SMART prehox3 320 461 IPR006563 -
Mepo5g00828 738 FunFam BEL1-like homeodomain protein 4 515 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00828 Mepo-Chr5 7934165 7943789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00828 1 559 Homeobox Transcription Factor Family AT4G36870 51.244 6.40e-150 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo5g00828 POX 3.8e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00828 - - cam:101513121 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00828 5 7934165 7943789 Mepo5g00828 5 7934165 7943789 ECH
Mepo1g01999 1 20472953 20482079 Mepo5g00828 5 7934165 7943789 ECH
Mepo5g00828 5 7934165 7943789 Mepo1g01999 1 20472953 20482079 PCT